Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1525 |
Symbol | |
ID | 3626926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1881756 |
End bp | 1882382 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637700409 |
Product | transposase |
Protein accession | YP_305056 |
Protein GI | 73669041 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAATC TATTCTCATT CATCAAAGAG TATCTTGTCG ATCAGGAAGA CGGAATTCGT CATCTAATTA CCTGGTTTTT GAATCTTGTC ATGGAGGAGG AAGCCCTCCT CCAATCTTGT GCACAACGTT ATGAGCGTAC TGATTCACGA AAAGCTAGTA GAAACGACTA CAAATCTCGA ATTCTCCTTA CCAAATATGG AGAACTTGAA TTGTTAAAGC CTCAGTTCCG TGAATTTCCT TTTGAAACTC AAGTATTTGA AAAGTATTCC AGGGTTGAAA AGTCCATATT AGCTGATGTA GCGGAATCTT ACCTTCAAGG AGTTTCCACC CGACGGGTGG AAAAGGTCAT GACTGCTTTA GGAGTAGAGG GAATCTCAGC CTCTTCTGTT TCTAGAATTA CTAAAGAACT TGATAAAGAA CTTGATGAAA AAGTTGAAGA ATTTCTCTCA AAGCCAATAG AACATGAAAT TCCTTACCTT TTTGTTGATG CGACTTATCT TAAAGTAAGA GATGGACTCC ATTATGAAAA TAAAGCTCTT TTTGTAGTTG CTGGAATTAG AGATGATGGT TTACGTGAGA TTCTTGGAGT AAGATTGGCA GACAGTGAAG ACTCTCTATT CTGGTAA
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Protein sequence | MVNLFSFIKE YLVDQEDGIR HLITWFLNLV MEEEALLQSC AQRYERTDSR KASRNDYKSR ILLTKYGELE LLKPQFREFP FETQVFEKYS RVEKSILADV AESYLQGVST RRVEKVMTAL GVEGISASSV SRITKELDKE LDEKVEEFLS KPIEHEIPYL FVDATYLKVR DGLHYENKAL FVVAGIRDDG LREILGVRLA DSEDSLFW
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