Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1490 |
Symbol | |
ID | 3627547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1840374 |
End bp | 1842014 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637700376 |
Product | hypothetical protein |
Protein accession | YP_305025 |
Protein GI | 73669010 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.665222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTATC CAGATGACGA TACTAAGAAT AGGAAGTTAG TAAGTCATTC AATTGTGTAT ATGATATTAC TTGTAGGTTG CCTTTATTAT CTGCATCTAC CTGAAAAATA TGCTAATATT CTTAAAGTAC TCTATTTAAT ATCTATAATT CCACTTATTG TAATAATATT CATTCCGAAT AAATCAAATT TAACTTGGAT AAAAAGAATA CTTATTTATT TTATTGTCAT GGTAATATCT TTGTTTGTAT CAAATGCTAT TTTATCAACT TTTGAACTTT TTTTAAATAC GACTATGGGT AATACTAACA TTGATAATTC TAGATACATG CTCAGTGCTT TAATACAAAG TGAAGCTGCC ATAGTTGCAA TAGTAGTTAC ACTGACTTTA GTGGCAGTTC AGCAGACATC ATCATCCTAC TCAACAAGAT TAATAGATAT ATTTAAAAAT AGAAATCCAG ACTTTTGGAT ACTTTTGATA ATATATATAG GAGCAATAAT TTATCAACTT AGCATATTAA CAAATTTAAA TGATAATGCA ATATCAGATG GTCATATTTT TTTCGCTTAT TTTTTAGGAT TATTTTCATT TATCGCTTTA ATACCTTATA TGCTGAATAC AATTGATTTA CTTAAACCTT TAACAATGAT GATGTTTCTA TCAGAGAAAA TTACAAAAAA TAATATTCTA TCAATAGAGA CAAAAGATTT TGACTTCTTC AGCGGTTTGT ATAATCGTAG CTCAGATAAT ATTTTTTTAA ACACTGAAGA CCTTAATGTA AACAACAAAG ATCCTGTTTT ACCAATAATA GACATAGTAA ATAGCTCGCT AATGAAACAT GATTATGATA CTTCAAGAGA TGGTTTGTTA GTCTTAAGAA AGATTTCTTT TGATATATTG AAAAATAATG ATATTAAAGA CGAAGAGCTT GAAAAAATAT TCAATTTATT CTCAAAACAC TTTCTTAGCA CTGGAAAATT AGCTATACAT AAGAGCGATG ATGAGTGTGT TATTTTAGTT CTAAACTGGT TTTATGAGAT TATGATGATT TTTATTGAGA GGCAAAAGGA TTCTGAAGCA TCACTAGCGC TCGGTAGGAT TGGTGAAATT GGAAAAATTG CAGCTGAGCA AAGAAATATG AGGATGACAG TTGTGTCTAT TAGACATTTT CAAGCTATTA TTGACACATC ATCTGAAATA AATATGAAAT ACTTGCAAAG GACCGTAGCT CACTCTCTCA ACGACATTGG CGAAATATCT GCTCAATATA AGATAAGAGG TGTATACCAT GATATATTGC AACCACTTTC AACAATAATA TATAGAGATT TTGTAGGCAC GTATATGGAA GAAGAATATG AAGAGTACAG CGAAGAAGAA TTTGAAGAGT ATGTGGAGGA AGATAAATTA CTAGATGAGT ATTTTAAAGA ACTTGATAAG ATGCCTAATG ATTTGGTTAT GTTAACGTTG AGAGGAATAT GTAGGATAGG ACAAGTCCTG TATGAAAAAA ATATGACTGA TGACTTGGAA TATATAACTA CATTTATCAA AGTCATTATA AATCAAGCAC CAAAATATGG TAGAGAAGAT GCACTTAATT TGGCAAGTGA TTTTTTAAGT TCATCAATAA AATGGAAGTA A
|
Protein sequence | MNYPDDDTKN RKLVSHSIVY MILLVGCLYY LHLPEKYANI LKVLYLISII PLIVIIFIPN KSNLTWIKRI LIYFIVMVIS LFVSNAILST FELFLNTTMG NTNIDNSRYM LSALIQSEAA IVAIVVTLTL VAVQQTSSSY STRLIDIFKN RNPDFWILLI IYIGAIIYQL SILTNLNDNA ISDGHIFFAY FLGLFSFIAL IPYMLNTIDL LKPLTMMMFL SEKITKNNIL SIETKDFDFF SGLYNRSSDN IFLNTEDLNV NNKDPVLPII DIVNSSLMKH DYDTSRDGLL VLRKISFDIL KNNDIKDEEL EKIFNLFSKH FLSTGKLAIH KSDDECVILV LNWFYEIMMI FIERQKDSEA SLALGRIGEI GKIAAEQRNM RMTVVSIRHF QAIIDTSSEI NMKYLQRTVA HSLNDIGEIS AQYKIRGVYH DILQPLSTII YRDFVGTYME EEYEEYSEEE FEEYVEEDKL LDEYFKELDK MPNDLVMLTL RGICRIGQVL YEKNMTDDLE YITTFIKVII NQAPKYGRED ALNLASDFLS SSIKWK
|
| |