Gene Mbar_A1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1418 
Symbol 
ID3627454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1748256 
End bp1749599 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content47% 
IMG OID637700307 
Productmetallo-beta-lactamase 
Protein accessionYP_304957 
Protein GI73668942 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID[TIGR00649] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000201803 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00374551 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGAAA TAGGAATTGT TGCAGTCGGC GGTTACAATG AGATGGGCCG TAACATGACT 
GCAGTCATTG TAGGCGAAGA TATCATCATT CTGGATATGG GGCTTCGTCT CGATAGGGTT
CAGATCCATG AGGATGTTGA AATTGATAAA ATGCATTCTC TCGAACTTAT TGAGATGGGA
GCAATTCCTG ATGATACTAT TATGAAAGAA ATCAATGGAA CTGTCCGGGC AATTGTCTGT
ACTCATGGGC ACCTTGACCA CATAGGTGCA ATTCCAAAAC TTGCCCACAG GTATAATGCC
CCAATTATCT CTACACCCTA TACAACGGCT CTTATCAAAC AGCAGATCGA AGCCGAACGC
AAGTTTGAGG TTTGCAACAG GGTTATTCCA TTAAATGCGG GCGGAACTTA CCAGGTTACG
GAAGATATTT CCATTGAGTT CATCAACGTC CAGCATAGTA TTATTGACTG TGTGCTTGCA
GCAGTTCACA CTCCAATTGG GGCGGTCCTT TACGCCTGCG ACTTTAAGCT GGACCGCACT
CCGACAATGG GGGAAGCTCC TGATTTCGAG CGCCTTAAAA GCCTCGGGAA AGAAGGAGTT
ATAGCAATGA TTGTAGAGAG CACGAATGCC GGACGTTCAG GTAAAACTCC GTCGGAAAAG
ATCGCAAAGG ATATGGTCAG GGACGTACTG CTTGGAACAG AAGAGTCCGA AGTAGGGATG
ATTATTACCA CCTTTGCCTC CCACATTCCC AGACTAAAAG CAATTATTGA AGCGGCAGAG
GAAATGGGCA GGATTCCTGT GCTCCTGGGG CGTTCAATGG AACGCTATGT TGGAGCTGCT
AAAGACCTTG GCTATCTGGA ACTGCCTTCC AATGTCGAGA TGCACGGACA GAGGAAAGAT
GTAGATAGAG CTCTCAAACG CATTATCCAG GAAGGAAAGA ACAAGTACCT GCCAATCGTC
ACCGGACACC AGGGAGAGCC AGGCTCCATA CTTGTGCGCA TTGCAAACGG GGAAACTCCA
TATACAATTG AGCCAGGAGA TCGGGTTATT TTCTCTGCAA ACGTGATTCC GAGTCCCATG
ACTCAGGCTA ACCGCTATGC CCTTGAGACC AAGCTCAAGA TGCGGGGCGC CAGGATTTAT
GACAATGTGC ACGTATCAGG GCACGCATAT CGGGAAGACC ACTGGGAACT CTTGCGTATG
GTGAATCCTG AACATGTAAT TCCTGCCCAT GGAGATATGG AGATGCACGG ACACTACATC
GAGATGGCGG AAGATGCCGG GTATGTACTC GGAGATACAG TACACCTTCT CAGAAACGGT
GAAGTGTTAT ATATAGAAGA ATAA
 
Protein sequence
MTEIGIVAVG GYNEMGRNMT AVIVGEDIII LDMGLRLDRV QIHEDVEIDK MHSLELIEMG 
AIPDDTIMKE INGTVRAIVC THGHLDHIGA IPKLAHRYNA PIISTPYTTA LIKQQIEAER
KFEVCNRVIP LNAGGTYQVT EDISIEFINV QHSIIDCVLA AVHTPIGAVL YACDFKLDRT
PTMGEAPDFE RLKSLGKEGV IAMIVESTNA GRSGKTPSEK IAKDMVRDVL LGTEESEVGM
IITTFASHIP RLKAIIEAAE EMGRIPVLLG RSMERYVGAA KDLGYLELPS NVEMHGQRKD
VDRALKRIIQ EGKNKYLPIV TGHQGEPGSI LVRIANGETP YTIEPGDRVI FSANVIPSPM
TQANRYALET KLKMRGARIY DNVHVSGHAY REDHWELLRM VNPEHVIPAH GDMEMHGHYI
EMAEDAGYVL GDTVHLLRNG EVLYIEE