Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1418 |
Symbol | |
ID | 3627454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1748256 |
End bp | 1749599 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637700307 |
Product | metallo-beta-lactamase |
Protein accession | YP_304957 |
Protein GI | 73668942 |
COG category | [R] General function prediction only |
COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000201803 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00374551 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACTGAAA TAGGAATTGT TGCAGTCGGC GGTTACAATG AGATGGGCCG TAACATGACT GCAGTCATTG TAGGCGAAGA TATCATCATT CTGGATATGG GGCTTCGTCT CGATAGGGTT CAGATCCATG AGGATGTTGA AATTGATAAA ATGCATTCTC TCGAACTTAT TGAGATGGGA GCAATTCCTG ATGATACTAT TATGAAAGAA ATCAATGGAA CTGTCCGGGC AATTGTCTGT ACTCATGGGC ACCTTGACCA CATAGGTGCA ATTCCAAAAC TTGCCCACAG GTATAATGCC CCAATTATCT CTACACCCTA TACAACGGCT CTTATCAAAC AGCAGATCGA AGCCGAACGC AAGTTTGAGG TTTGCAACAG GGTTATTCCA TTAAATGCGG GCGGAACTTA CCAGGTTACG GAAGATATTT CCATTGAGTT CATCAACGTC CAGCATAGTA TTATTGACTG TGTGCTTGCA GCAGTTCACA CTCCAATTGG GGCGGTCCTT TACGCCTGCG ACTTTAAGCT GGACCGCACT CCGACAATGG GGGAAGCTCC TGATTTCGAG CGCCTTAAAA GCCTCGGGAA AGAAGGAGTT ATAGCAATGA TTGTAGAGAG CACGAATGCC GGACGTTCAG GTAAAACTCC GTCGGAAAAG ATCGCAAAGG ATATGGTCAG GGACGTACTG CTTGGAACAG AAGAGTCCGA AGTAGGGATG ATTATTACCA CCTTTGCCTC CCACATTCCC AGACTAAAAG CAATTATTGA AGCGGCAGAG GAAATGGGCA GGATTCCTGT GCTCCTGGGG CGTTCAATGG AACGCTATGT TGGAGCTGCT AAAGACCTTG GCTATCTGGA ACTGCCTTCC AATGTCGAGA TGCACGGACA GAGGAAAGAT GTAGATAGAG CTCTCAAACG CATTATCCAG GAAGGAAAGA ACAAGTACCT GCCAATCGTC ACCGGACACC AGGGAGAGCC AGGCTCCATA CTTGTGCGCA TTGCAAACGG GGAAACTCCA TATACAATTG AGCCAGGAGA TCGGGTTATT TTCTCTGCAA ACGTGATTCC GAGTCCCATG ACTCAGGCTA ACCGCTATGC CCTTGAGACC AAGCTCAAGA TGCGGGGCGC CAGGATTTAT GACAATGTGC ACGTATCAGG GCACGCATAT CGGGAAGACC ACTGGGAACT CTTGCGTATG GTGAATCCTG AACATGTAAT TCCTGCCCAT GGAGATATGG AGATGCACGG ACACTACATC GAGATGGCGG AAGATGCCGG GTATGTACTC GGAGATACAG TACACCTTCT CAGAAACGGT GAAGTGTTAT ATATAGAAGA ATAA
|
Protein sequence | MTEIGIVAVG GYNEMGRNMT AVIVGEDIII LDMGLRLDRV QIHEDVEIDK MHSLELIEMG AIPDDTIMKE INGTVRAIVC THGHLDHIGA IPKLAHRYNA PIISTPYTTA LIKQQIEAER KFEVCNRVIP LNAGGTYQVT EDISIEFINV QHSIIDCVLA AVHTPIGAVL YACDFKLDRT PTMGEAPDFE RLKSLGKEGV IAMIVESTNA GRSGKTPSEK IAKDMVRDVL LGTEESEVGM IITTFASHIP RLKAIIEAAE EMGRIPVLLG RSMERYVGAA KDLGYLELPS NVEMHGQRKD VDRALKRIIQ EGKNKYLPIV TGHQGEPGSI LVRIANGETP YTIEPGDRVI FSANVIPSPM TQANRYALET KLKMRGARIY DNVHVSGHAY REDHWELLRM VNPEHVIPAH GDMEMHGHYI EMAEDAGYVL GDTVHLLRNG EVLYIEE
|
| |