| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1344 |
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| Symbol | |
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| ID | 3627417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1656535 |
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| End bp | 1657527 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637700234 |
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| Product | dipeptide ABC transporter, permease protein |
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| Protein accession | YP_304885 |
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| Protein GI | 73668870 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.782695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAAACA ATGAAAAAAT AGCGGGCTTC ATCGGAAAAA AGGCCTTCAG GTTGGCAAGC
CTTTTGATTA TAGTTTGTCT TGCAAGTTTC ATGCTTATAC AGTATTCGCC TATAGATCCC
GTTAGAGCCT ATATCGGGGA AATGCCAGTA ACCGCAGAAC ACAAAGCTAA ACTTGAAGCT
TACTGGGGGG TTAATATCCC TCCGCAGGAA AAGTTCCTGA ACTGGGCTGG AGATATTCTT
AAAGGAGACT TTGGGACTTC ACTGATTTAT AGGGTTCCAG TTATTGATGT CATTAAAGAA
CGATTTACAG CTTCCCTTGT TCTAATGGGA ATTTCTTGGC TATTTTCAGG AATTTTAGGT
TTTGCTTTAG GAATAATAGC GGGCGCGAAG CAAGGTACGT GGGTCGATAA GGCAATAAAA
ATTTATTGTT ACGCTCTGGC TGCTGCACCG ACATTCTGGT TAGCACTGGT TCTTCTAATA
GTGTTTTCAG TATATTTGGG CTGGTTCCCA ATAGGATTAC GTGTACCTAT AGGGGTTACA
GCCGACAATG TAACGTTTTT TGATTGGTTC AAGCGTTTAA TTCTCCCGGC ACTAACTTTG
AGTTTATTAG ACATTGCCAA AATTACAATG TTCACTCGAG AAAAATTAAT CGAAGTCCTC
TCCAGTGATT ATGTCTTATT TGCAAAGGCA AGAGGTGAAA AAGGTCTGGA TCTTGTATTG
AGGCATGGAA TTCGAAACGT TGCACTTCCG GCCATTACCC TGCAGTTTTT AGGATTCAGT
GAACTGTTCG GGGGCACAGT TCTGGTTGAA CAGGTATTCT CATATCCCGG AATCGGACAG
ACTGCAGTGG CAGCAGGACT GGGATCCGAT GTACCACTGC TTTTGGGAAT AGTCATCTTC
AGCACTTTAT TTGTATTCTT CGGAAACCTG ATTGCTGATA TTATCTATGA ATTTGTTGAC
CCCAGGATAA AGCAACAGGA GGCATTAATG TGA
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| Protein sequence | MSNNEKIAGF IGKKAFRLAS LLIIVCLASF MLIQYSPIDP VRAYIGEMPV TAEHKAKLEA
YWGVNIPPQE KFLNWAGDIL KGDFGTSLIY RVPVIDVIKE RFTASLVLMG ISWLFSGILG
FALGIIAGAK QGTWVDKAIK IYCYALAAAP TFWLALVLLI VFSVYLGWFP IGLRVPIGVT
ADNVTFFDWF KRLILPALTL SLLDIAKITM FTREKLIEVL SSDYVLFAKA RGEKGLDLVL
RHGIRNVALP AITLQFLGFS ELFGGTVLVE QVFSYPGIGQ TAVAAGLGSD VPLLLGIVIF
STLFVFFGNL IADIIYEFVD PRIKQQEALM
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