Gene Mbar_A1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1250 
Symbol 
ID3627850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1554476 
End bp1555087 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content45% 
IMG OID637700141 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_304794 
Protein GI73668779 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTA ACACCTTGAG ACCTTTTGCC TCAAAAGTTA TCGACCCATT GGCAGACTAT 
TTCGTTAGAT ATGAGGTCTC ACCTAACACG GTTTCCATAG CTTCCCTTAT ATGTGCATTC
TTTGCAGGAC TGAGTTTTTA TTACTCACCT GCGTCCAGGG AATTTATCCT GCTGGCAGGC
ATCCTGGTAA TACTTAACTC TATTTTTGAC GCCCTTGACG GGATAATTGC ACGGAAATCA
AATAGGGCAA CCCCAAGAGG TGACTTTCTG GATCATGTGA TTGACCGTTA CTCGGATGTT
TTTATAATAT GTAGCATCTT TTTTGCAGGT TACGTCTCCT GGCAGTTAGG AGTTACGGCA
ATTGTAGGTG TGCTGCTTAC CAGCTATCTC GGGACCCAGG CCCAGGCGCT CAGCCTTGGA
AGATACTATG GTGGGATAAT GGGCAGGGCT GACCGACTTG TAGTTATAAT TTTTGCATCT
TTCGGCAACT TTGCCTTTCC AGTGCCAATT GCAGGTTTTT CAATTCTTGG CTGGGCCGTC
ATCCTGATTG CTGTAACCAG CCACATAACA GCAATCCAGA GAATCTACTA TATATGGAAA
GAGTTGCAGT AA
 
Protein sequence
MTFNTLRPFA SKVIDPLADY FVRYEVSPNT VSIASLICAF FAGLSFYYSP ASREFILLAG 
ILVILNSIFD ALDGIIARKS NRATPRGDFL DHVIDRYSDV FIICSIFFAG YVSWQLGVTA
IVGVLLTSYL GTQAQALSLG RYYGGIMGRA DRLVVIIFAS FGNFAFPVPI AGFSILGWAV
ILIAVTSHIT AIQRIYYIWK ELQ