Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1250 |
Symbol | |
ID | 3627850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1554476 |
End bp | 1555087 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637700141 |
Product | CDP-alcohol phosphatidyltransferase |
Protein accession | YP_304794 |
Protein GI | 73668779 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTTA ACACCTTGAG ACCTTTTGCC TCAAAAGTTA TCGACCCATT GGCAGACTAT TTCGTTAGAT ATGAGGTCTC ACCTAACACG GTTTCCATAG CTTCCCTTAT ATGTGCATTC TTTGCAGGAC TGAGTTTTTA TTACTCACCT GCGTCCAGGG AATTTATCCT GCTGGCAGGC ATCCTGGTAA TACTTAACTC TATTTTTGAC GCCCTTGACG GGATAATTGC ACGGAAATCA AATAGGGCAA CCCCAAGAGG TGACTTTCTG GATCATGTGA TTGACCGTTA CTCGGATGTT TTTATAATAT GTAGCATCTT TTTTGCAGGT TACGTCTCCT GGCAGTTAGG AGTTACGGCA ATTGTAGGTG TGCTGCTTAC CAGCTATCTC GGGACCCAGG CCCAGGCGCT CAGCCTTGGA AGATACTATG GTGGGATAAT GGGCAGGGCT GACCGACTTG TAGTTATAAT TTTTGCATCT TTCGGCAACT TTGCCTTTCC AGTGCCAATT GCAGGTTTTT CAATTCTTGG CTGGGCCGTC ATCCTGATTG CTGTAACCAG CCACATAACA GCAATCCAGA GAATCTACTA TATATGGAAA GAGTTGCAGT AA
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Protein sequence | MTFNTLRPFA SKVIDPLADY FVRYEVSPNT VSIASLICAF FAGLSFYYSP ASREFILLAG ILVILNSIFD ALDGIIARKS NRATPRGDFL DHVIDRYSDV FIICSIFFAG YVSWQLGVTA IVGVLLTSYL GTQAQALSLG RYYGGIMGRA DRLVVIIFAS FGNFAFPVPI AGFSILGWAV ILIAVTSHIT AIQRIYYIWK ELQ
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