Gene Mbar_A1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1222 
Symbol 
ID3624269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1509018 
End bp1509974 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content47% 
IMG OID637700112 
Productbeta-ribofuranosylaminobenzene 5'-phosphate synthase 
Protein accessionYP_304769 
Protein GI73668754 
COG category[R] General function prediction only 
COG ID[COG1907] Predicted archaeal sugar kinases 
TIGRFAM ID[TIGR00144] beta-RFAP synthase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA TAACCACTCC TTGCCGAATT CATATGACAC TTATTGATAT GAATGCGGAG 
ATCGGAAGAG TCGATGGAGG AGCAGGACTA ACCCTTTCCT CTCCCAATAT AAAAATTACG
GCTGAAGAAG CCGATGGAGT CAATATAGAA GGCCGGCAGG GTTTTGCCGA TCGGATGAAA
AGAGCTGCAG AATCCCTGCT TCCAGAGGGT AAAGGAATCA GGATAAACGT ACAGGAAGTG
TACCCAGCAC ATGTAGGTTT CGGATCAGGA ACTCAGTCAT CCCTGGCCGC GGCAGCAGCC
GTTAATGAAC TGTATGGGCT TGGGAAGAGC GTTAGAGAAC TTGCACTTGC AGTAAAAAGA
GGAGGGACTT CGGGTATAGG AGTAGCTGCT TTTGAGAAAG GCGGGTTTAT AGTTGACGGA
GGGCATAAGT TCAACGATAA AAATGGTTTT ATGCCATCAG CTGCCAGCAA AGTACCGCCC
GGGCCAGTGC TCTTCAGAGA GGATTTTCCT CAATGGGACA TGGTAGTAGC AATCCCCAAC
GACAAGGGAA TGCATGACCA GGAAGAAGTC GAGACCTTCA AGAAATTCTG CCCCCTCCCT
GTAGAAGAAG TCAGGGAAAT TTCCCATGTC GTACTCATGC AGATGATGCC TGCCGTGATA
GAAGAAGATA TAGTGAATTT CGGGGCCGCA GTAAATCATG TTCAGACTGT TGGCTTTAAC
AAAAGGGAGA GCCTTATCTG GCCTGAGTTT GTGAAAAATA TTGCATCTTT TATGCGCAGC
CGGAGCTACG GAGCCGGGGT AAGTTCCTTT GGGCCTGTAG TATATTCTTT TGTAGACAAC
AAATCAGAAG GCAGGCAGCT TCAGTCGGAA GTCCAGAAAA TGCTTGACGA GTCGGTAGGT
GGAATCACAA TGATGACTCG GGCAAAGAAC AGCGGTGCAG AAATATCTGA AATATAA
 
Protein sequence
MIKITTPCRI HMTLIDMNAE IGRVDGGAGL TLSSPNIKIT AEEADGVNIE GRQGFADRMK 
RAAESLLPEG KGIRINVQEV YPAHVGFGSG TQSSLAAAAA VNELYGLGKS VRELALAVKR
GGTSGIGVAA FEKGGFIVDG GHKFNDKNGF MPSAASKVPP GPVLFREDFP QWDMVVAIPN
DKGMHDQEEV ETFKKFCPLP VEEVREISHV VLMQMMPAVI EEDIVNFGAA VNHVQTVGFN
KRESLIWPEF VKNIASFMRS RSYGAGVSSF GPVVYSFVDN KSEGRQLQSE VQKMLDESVG
GITMMTRAKN SGAEISEI