Gene Mbar_A1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1178 
Symbol 
ID3624525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1449141 
End bp1450058 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content48% 
IMG OID637700069 
ProductGMP synthase subunit B 
Protein accessionYP_304726 
Protein GI73668711 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAC CCGAAAAATT CATTCCAAAA GCAGTTGAGA AAATTAGCAA GGAAATAAAG 
GACGGGAGAG CAATTATTGC ACTCTCAGGC GGCGTGGACA GTTCTGTTTG TGCGGAACTG
GCTCACAGGG CAATAGGGGG TAGGCTGCAG CCGATCTATA TTGACACAGG GCTCATGAGA
AAAGGAGAGA CCGAGAGAAT AAAGCATATT TTCTCCCACA TGAACCTGGA TATTGTGTAT
GCAAAGGACA GGTTCCTTGC AGCCCTGAAA GGCATAACTG ACCCTGAAGA GAAAAGGAAG
GCTATAGGTG AGACATTCAT CCGGGTCTTT GAAGAAGAGG CAAGGAAACT TGAAGCCGAT
TATCTTATCC AGGGTACGAT TTACCCTGAC AGAATCGAGT CCGAAGGCGG AATCAAATCC
CACCACAATG TTGGAGGGCT GCCCAGCGTA ATGGATTTCA AGAAGATCGT TGAGCCCATC
GAGGACCTTT ACAAAGATGA AGTGAGGGAA GTTGCCTGGG CGCTCAAGCT ACCTGACGAA
ATTTGTGAAA GGATGCCTTT CCCCGGACCA GGTCTGGCTG TGCGGATTCT TGGAGAAGTT
ACAGAGGAGA AGCTTGAGGT TGCACGGGAA GCAAACTCTA TAGTTGAAGA AGAACTTCTT
GACAGGTTCT GCCCCTGGCA GACTTTCGCA GCTGTGATTG GCAAAGGAAC AGGCGTAAAG
GGAGATATCC GGGCTTACGG CTGGATCATA GCTGTAAGAG CCGTAGGCTC CAGAGACGGA
ATGACTGCAG AAGCGCTCGA GCTTCCCTGG GATGTGCTCA AAAAGTTGGA ATCAAGAATT
ACCTCTGAAA TTCCAAAAGT AGCCAGGGTG GTTTATGATA TTACACCAAA ACCGCCTGCA
ACTATTGAGT TTGAGTGA
 
Protein sequence
MVKPEKFIPK AVEKISKEIK DGRAIIALSG GVDSSVCAEL AHRAIGGRLQ PIYIDTGLMR 
KGETERIKHI FSHMNLDIVY AKDRFLAALK GITDPEEKRK AIGETFIRVF EEEARKLEAD
YLIQGTIYPD RIESEGGIKS HHNVGGLPSV MDFKKIVEPI EDLYKDEVRE VAWALKLPDE
ICERMPFPGP GLAVRILGEV TEEKLEVARE ANSIVEEELL DRFCPWQTFA AVIGKGTGVK
GDIRAYGWII AVRAVGSRDG MTAEALELPW DVLKKLESRI TSEIPKVARV VYDITPKPPA
TIEFE