| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1080 |
|---|
| Symbol | |
|---|
| ID | 3627490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1323717 |
|---|
| End bp | 1324076 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637699971 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304628 |
|---|
| Protein GI | 73668613 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3355] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATT TTGCCTGTAA AGAGTTCAAA ACCGAAGACG TGATCAAGTG TGCCCTTAAC
CTTACAAAGG CTGACCTTAA GGTTATGAAG TACTTTTTAA ATGAGAAAGA GCAGTGGGTT
GACACTGATT CTCTTTCAAA AGTCTTGAAG CTGGATATTT CTACAATCCA GCGCTCCGTC
AAAAAACTGT ATGAAAAAGA CATTCTGCAA AGGTCGCAGC AGAACCTGGA TGGAGGAGGC
TATGTTTTCA AGTATAAGAT CAACTCAAGG GCCAAAATAA AAAATATCAT CATGACCGTG
GTGAATTCCT GGGCTGAACG GCTCGGACAG GAACTTGAAA AATGGGAAAA CGGAGGTTGA
|
|---|
| Protein sequence | MIDFACKEFK TEDVIKCALN LTKADLKVMK YFLNEKEQWV DTDSLSKVLK LDISTIQRSV
KKLYEKDILQ RSQQNLDGGG YVFKYKINSR AKIKNIIMTV VNSWAERLGQ ELEKWENGG
|
|---|
| |