Gene Mbar_A1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1023 
Symbol 
ID3625602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1248570 
End bp1249604 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content43% 
IMG OID637699912 
Product5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 
Protein accessionYP_304571 
Protein GI73668556 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA TCATCTTTGA CGATATTGGG AGTTATCCCC TTCCTGACGG AGTCAGTAAG 
GAATGGGTCC AAAATGCCTT TAAAACGAGA ACTGAAGATG AGAAACTCTT TACGGTAATC
AATGATGCCT TTCAGCAAAA AGTAGATGCA GGTGTTAATG TTCCTACCTA TCCTCAGTAT
CAGGATATGA ATGAACAGTT CCTGAAGGTT ATTCGGGACT CTAATTGCTG TGACAGTCCC
TTTGAAGTAA AACTTGAGTG TGCCAGGATT GAGGAACTTG AGGCTATAGA GAAGGTTGCA
AAAGCCTATA AGGAACAATT CGGAGAGACA CTCAAGGTTC GGATCTGTGT AACTGGTCCA
ACTGAACTTT ATCTGAAGGA GTTTGGAGGT ACACGGTATA CGGATATCTA TTCTATTTTT
GCAAAAAGCG TGAATAATTT TGTAAGAAAT TCCATGAGAT CTGCAAAAAA TTTCAAGATT
GCAACGGTTT CTATTGATGA ACCAAGTATA GGGCTGAACC CTGAGCTTGC TTTTGATGAG
AACGATATTA TTTCTGCCCT TACCAGCGCC TCAAAAGCGG CCAGTAAGTG GGGAGCTGAC
GTACAGATTC ACCTTCATTC TCCTCTCTAC TATAATATTG CCTGTCAGGT CCCCACAATA
AACGTCATAG GAGTGGAGTC CGCAGGCACA CCCTCTTACC TGGAGTTGAT AGACAAGAAA
ATTCTGGAGG ACACAGATTG CTTCCTGAGG CTTGGGATTG CAAGAACTGA TGTCTATACA
CTGGCAGGAA TCATTAGTGA AAAGTACTGT ACTAACGTCT GGAAAGAGCA GCAATACCTT
CCAGAAATTG TTAGCGGACT TGAGACCCCG GCTACGATAA CTAAAAGGCT GAAGGTTTAT
TACAGGCGTT TTGGCAACCT GATAAAGTAT GTGGGTCCTG ACTGCGGGTT GGGCTCTTGG
CCTAACCAGA AAATAGCATT TATATTGCTT TCCAATATAG CTCAGGGTAT AAGGGATTTC
AGGGAATCTC TCTAA
 
Protein sequence
MEEIIFDDIG SYPLPDGVSK EWVQNAFKTR TEDEKLFTVI NDAFQQKVDA GVNVPTYPQY 
QDMNEQFLKV IRDSNCCDSP FEVKLECARI EELEAIEKVA KAYKEQFGET LKVRICVTGP
TELYLKEFGG TRYTDIYSIF AKSVNNFVRN SMRSAKNFKI ATVSIDEPSI GLNPELAFDE
NDIISALTSA SKAASKWGAD VQIHLHSPLY YNIACQVPTI NVIGVESAGT PSYLELIDKK
ILEDTDCFLR LGIARTDVYT LAGIISEKYC TNVWKEQQYL PEIVSGLETP ATITKRLKVY
YRRFGNLIKY VGPDCGLGSW PNQKIAFILL SNIAQGIRDF RESL