Gene Mbar_A0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0874 
Symbol 
ID3626182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1054666 
End bp1055454 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content43% 
IMG OID637699761 
Productarchaetidylserine synthase 
Protein accessionYP_304428 
Protein GI73668413 
COG category[I] Lipid transport and metabolism 
COG ID[COG1183] Phosphatidylserine synthase 
TIGRFAM ID[TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAT TTCAAATGTT AAGACTCCCG GACCTGGTCT CTCTTTTGAA CCTCATCTGC 
GGAATCAGCT CAATTGCAGT AGCTGCCCAG GCTACAGTCC AGGCTGCCAC GTCTCAAACG
GCTGCTCAGA ATGGATTTGT CCTGGCCTTG ATCTTACTTC TTATTGCAGC AATTGCAGAC
GGGGCGGACG GGTACATTGC TAGGCGATTT AAAGGAGGAG AACTCGGAGA ACAACTTGAT
TCCCTGGCAG ATGCAGTTTC TTTTGGGGTG GCTCCTGCTC TTCTCATATA CTTGCAGTTT
GGGAAAATAA ATCCTCTTGT CGGAGATCCA GACCCTCTTG TTGCGGTATT TCCGGTTTTT
TACGCTATTT GCGGTGTGCT CAGGCTCGCA CGCTTCAATT CCATGGCTCC CAGTAAAACC
GGATTTGAGG GCCTTCCCAT AACTGCAGGC TGTGTTATGC TTGTTACATA CATGTTGTTA
AGCGAAGACT TTGTCAAGAT AGACTTCCTT CTAGCACTGA CCCTTTGTCT CTCTATTCTT
ATGGTGAGTT CGGTAAATTA TCCGAAAATC AAGAACGTCA GGATTCTCGC TTTTATAGCT
TCCATTTTCG GGATAACTAT GCTTCTCTAC CTGTATAATA TTGAATATAT GCGAATTTTT
TCGATCCTGC CTTTTATCCT GATGTTGATG TACATCTTTT CTCCTTTTTT TAAGATCCCT
ATATTAAGCA ACCTGGGTAG TAAGGAATAT CGAAATAAAG AACTGAGAAT CGGGAAAGAA
AAACAGTAA
 
Protein sequence
MNVFQMLRLP DLVSLLNLIC GISSIAVAAQ ATVQAATSQT AAQNGFVLAL ILLLIAAIAD 
GADGYIARRF KGGELGEQLD SLADAVSFGV APALLIYLQF GKINPLVGDP DPLVAVFPVF
YAICGVLRLA RFNSMAPSKT GFEGLPITAG CVMLVTYMLL SEDFVKIDFL LALTLCLSIL
MVSSVNYPKI KNVRILAFIA SIFGITMLLY LYNIEYMRIF SILPFILMLM YIFSPFFKIP
ILSNLGSKEY RNKELRIGKE KQ