Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0816 |
Symbol | |
ID | 3626838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 990661 |
End bp | 991353 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637699707 |
Product | hypothetical protein |
Protein accession | YP_304373 |
Protein GI | 73668358 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2203] FOG: GAF domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATCAGG CACTATTGGA TGAAAATAAG TTACTGGTAG ATGATAACAA TGCATTAAAG GAAGAGATAC AGAGTCTAAA AGCATGTCTG GCGCAGGCTG AAGGATTTGA ACGGACTATA GGCAAAGTTG ATCTGGATTC CAAACAGGTA GAGATAACCT GTAGTGAACG CGAGAAACAG TTAATGTTTG ATCTCGATGC AATGACTAGA CTGTATAATA TCAGCATTTT GTTCATTCGC GAAGGCAATC TTGCACCAGT TCTTGTCGAA ATAGTCGATG CAGCAATTGC AATTTCTGGC GCTGACTTTG GCAATATCCA ATTACTGGAT CCCGAATCAT CTGAACTTAA GATTGTAGCT TCTCGTGGAT TTCCCAAATG GTGGCTGGAC TTCTGGAACA GTGTGTCTGT GGGAAAAGGA ACTTGTGGTA CGGCGCTTGG ACGCAAAGAA AGGGTAATTG TCGAGGATGT TGAACAAAGC CCAATTTTCG TAGGTACACC TGCTCTGGAA ATCCAACTTA AAGCTGGAAT ACGAGCGGTA CAATCTACAC CAATTGTGAG TCGGTTGGGA AAACCACTTG GTATGTTCTC AACACAATAT AAAACACCAC ATAAGCCAGA CAAAAACACA CTTCAAATGT TGGATCTTCT AGCTCTCAGT GCAGCCGATA TTATCGAAAG ATCACATATC TAA
|
Protein sequence | MYQALLDENK LLVDDNNALK EEIQSLKACL AQAEGFERTI GKVDLDSKQV EITCSEREKQ LMFDLDAMTR LYNISILFIR EGNLAPVLVE IVDAAIAISG ADFGNIQLLD PESSELKIVA SRGFPKWWLD FWNSVSVGKG TCGTALGRKE RVIVEDVEQS PIFVGTPALE IQLKAGIRAV QSTPIVSRLG KPLGMFSTQY KTPHKPDKNT LQMLDLLALS AADIIERSHI
|
| |