Gene Mbar_A0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0806 
Symbol 
ID3627925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp971677 
End bp972642 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content48% 
IMG OID637699697 
Productbeta-ribofuranosylaminobenzene 5'-phosphate synthase 
Protein accessionYP_304363 
Protein GI73668348 
COG category[R] General function prediction only 
COG ID[COG1907] Predicted archaeal sugar kinases 
TIGRFAM ID[TIGR00144] beta-RFAP synthase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAG TAGTGACTCC ATCCAGACTC CATCTTACCC TAATAGATCT CAATGCAGAG 
ATAGGCAGGG TCGATGGGGG AGCGGGAATC ACCCTGGAAT ATCCCGGCCT GGTAATTTCT
GCAACTAAAG CTGATAATAT AGAGATCATC GGTAATTCTC TTCTAGCAGG TAAAATGCAA
AAAGCTGCAC AGGCCATTCT TCCAACAGGA AAAGGAATAA AGCTGCATAT TAAAGATAGT
CTTCCTGATC ATGTAGGGCT CGGTTCCGGG ACCCAGGCCG CACTATCGAC AGCAGTAGCC
GTAAACAAAA TTTATGGACT GGAAAAAAGC GTTAGGGAAC TTGCAGTCGC AGTTGGAAGG
GGAGGCACAT CCGGTATAGG GGTTGCTGCT TTTGAAAATG GTGGCTTCAT TCTGGATGGG
GGGCATAAGT TCAAGGAAAA GGGTGCATTT TCTCCTTCTT CAGCCAGCCA TGTGCCTCCT
GGTCCGGTTC TTTTCAGAAG AAACTTTCCT GACTGGCCTA TTGTCCTTGT AGTTCCTAAA
GGAAAGGGTG CTCACGATGC GGAAGAAGTG GATATTTTCA AGAAATATTG TCCAATTCCC
CTTGCCGAAG TTCAGGAAAT TTCCCACGTA ATTCTCATGC AGATGCTTCC TGCACTTGTC
GAGGAAGACC TGGAAAGTTT TGGCAAAGCG ATTAACCACA TCCAGACTGT AGGTTTTAAG
AAAAGGGAAG TCGGACTTCA GTCACAGCCT GTTCTGGATA TCATGAATTA CATGCGTGAC
AACGGCGCGA GTGGCTCAGG CATCAGTTCT TTCGGGCCGG TAGTTTACGG AATTGTCGGA
AGCGTCGAGG AAGGCAAAAG ACTCCAGCAA GAAACTCAGC GCATGCTTGA TGAGTCCCTT
GGCGGGCGAG TCCTGCTCAC AAAGGGAAGG AACCGGGGTG CGGACATCTC TGGAGGTCCG
GATTGA
 
Protein sequence
MIKVVTPSRL HLTLIDLNAE IGRVDGGAGI TLEYPGLVIS ATKADNIEII GNSLLAGKMQ 
KAAQAILPTG KGIKLHIKDS LPDHVGLGSG TQAALSTAVA VNKIYGLEKS VRELAVAVGR
GGTSGIGVAA FENGGFILDG GHKFKEKGAF SPSSASHVPP GPVLFRRNFP DWPIVLVVPK
GKGAHDAEEV DIFKKYCPIP LAEVQEISHV ILMQMLPALV EEDLESFGKA INHIQTVGFK
KREVGLQSQP VLDIMNYMRD NGASGSGISS FGPVVYGIVG SVEEGKRLQQ ETQRMLDESL
GGRVLLTKGR NRGADISGGP D