Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0801 |
Symbol | |
ID | 3627920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 967478 |
End bp | 968101 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637699692 |
Product | integral membrane protein |
Protein accession | YP_304358 |
Protein GI | 73668343 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCCTTA TGAATTTATT ATCCAACATG ATGAACGTCT TCTCAACGGC TTTACTGATT CCTGTAATGT TTCTCCTCAC TATTCTCGTA TTTGTTTCCT TGATTCAATT AGGAGAATTC CTTTCCGAAT ATACAAAAAG GCATAGAGAC TGGAATAATC TGGAAACTAA CTGCAAAAAA ATTGAGTGCG AGCTTCAGAA TTCGGATTTT TCGGAAGCAT CCAGGGCTCT TGAGAATATC AAACAAAATT ACATGGTCAC TTCTTTTGCA CGAGAAGCTG CAAAATATCT GAAAGAGCGA CATTTTCCTG CAATTGAGAG GCTTTCGCAG GAATATGAAC TCAAGATGGC AAAGCGCCTT GAACATACAA AGATAACTTC AACTATCGGT CCCATGCTTG GCCTTATGGG AACGCTTATC CCATTAGGCC CTGCTTTGAT AGGGCTTTCA AAAGGAGACC TCGAGACCCT TGCGCAAAAC CTGATGATTG CCTTTGCGAC AACTGTTGTA GGGCTTTTTG CGGCCGGAAT AGGCTACGTA CTTACGCAGG TCAGACGGCG CTGGTACTGG GAAGATATGT CGGATATCGA TTATATCCTG GATACAATTG AGGAAAAGAA CTGA
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Protein sequence | MSLMNLLSNM MNVFSTALLI PVMFLLTILV FVSLIQLGEF LSEYTKRHRD WNNLETNCKK IECELQNSDF SEASRALENI KQNYMVTSFA REAAKYLKER HFPAIERLSQ EYELKMAKRL EHTKITSTIG PMLGLMGTLI PLGPALIGLS KGDLETLAQN LMIAFATTVV GLFAAGIGYV LTQVRRRWYW EDMSDIDYIL DTIEEKN
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