Gene Mbar_A0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0801 
Symbol 
ID3627920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp967478 
End bp968101 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content42% 
IMG OID637699692 
Productintegral membrane protein 
Protein accessionYP_304358 
Protein GI73668343 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCTTA TGAATTTATT ATCCAACATG ATGAACGTCT TCTCAACGGC TTTACTGATT 
CCTGTAATGT TTCTCCTCAC TATTCTCGTA TTTGTTTCCT TGATTCAATT AGGAGAATTC
CTTTCCGAAT ATACAAAAAG GCATAGAGAC TGGAATAATC TGGAAACTAA CTGCAAAAAA
ATTGAGTGCG AGCTTCAGAA TTCGGATTTT TCGGAAGCAT CCAGGGCTCT TGAGAATATC
AAACAAAATT ACATGGTCAC TTCTTTTGCA CGAGAAGCTG CAAAATATCT GAAAGAGCGA
CATTTTCCTG CAATTGAGAG GCTTTCGCAG GAATATGAAC TCAAGATGGC AAAGCGCCTT
GAACATACAA AGATAACTTC AACTATCGGT CCCATGCTTG GCCTTATGGG AACGCTTATC
CCATTAGGCC CTGCTTTGAT AGGGCTTTCA AAAGGAGACC TCGAGACCCT TGCGCAAAAC
CTGATGATTG CCTTTGCGAC AACTGTTGTA GGGCTTTTTG CGGCCGGAAT AGGCTACGTA
CTTACGCAGG TCAGACGGCG CTGGTACTGG GAAGATATGT CGGATATCGA TTATATCCTG
GATACAATTG AGGAAAAGAA CTGA
 
Protein sequence
MSLMNLLSNM MNVFSTALLI PVMFLLTILV FVSLIQLGEF LSEYTKRHRD WNNLETNCKK 
IECELQNSDF SEASRALENI KQNYMVTSFA REAAKYLKER HFPAIERLSQ EYELKMAKRL
EHTKITSTIG PMLGLMGTLI PLGPALIGLS KGDLETLAQN LMIAFATTVV GLFAAGIGYV
LTQVRRRWYW EDMSDIDYIL DTIEEKN