| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0769 |
|---|
| Symbol | |
|---|
| ID | 3626387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 930756 |
|---|
| End bp | 931895 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637699660 |
|---|
| Product | Fe-S oxidoreductase |
|---|
| Protein accession | YP_304326 |
|---|
| Protein GI | 73668311 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1453] Predicted oxidoreductases of the aldo/keto reductase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000125779 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC GATTAGGTTT TGGCTGTATG AGATTACCAC TTCTGGACAA AGATGATCAG
ACATCATTTG ACACAGAAGC ATTAAACAAA CTGGTAGATA CGTTTTTGGA AAAAGGATTT
ACTTACTTTG ATACCGCGTA TACATACCAT GGATTCAAGA GTGAGGAAGC CATTAGAGAG
GCTCTGGTAA AAAGGCATAG TAGAGATGAA TTTACTCTTG CGACGAAACT TCCTCCCAGA
ATGTTAAAAG CAGTGGAGGA TCAGGATCGA ATTTTTAATG AGCAACTGGA AAATTGTGGT
GTTGAATTTT TTGATTATTA CCTGCTTCAC AATATTGGTG TGAGTGCTTA TGAGCAGGCA
TGTAAATATG ATACATTCGG TTTTGCTTTG AAAAAAAAAG AAGAAGGCAA AATAAAGAAT
GTTGGTATGT CTTTTCATGA TACCCCGGAA CTACTGGATG AAATTCTAAC TGCTCATCCG
GAACTGGATT TTGTTCAGTT GCAGATCAAT TATATTGACT GGGAGAATCC CGGTATCCAG
TCAAGAAGAT GCCATGAAGT GGCAAGAAAA CATAACATGC CAGTTGTTGT AATGGAACCC
TGCAAGGGTG GAAATCTTGC CTCTGTTCCT GAAAAAGCAG AAGAACTGAT GAAAGCATAT
AATCCGGAAG CTTCCGTTGC CTCCTGGGCA ATCAGGTTTG CTACCAGTCA GGAAGGTGTC
ATGATGGTTC TTAGTGGTAT GAATACCATG GAACAGGTAC TTGATAATAC CTCATATATG
ACAGACTTCA AACCCCTGAA CGAGGAAGAA TACAGGATCA TCAGTCAGGT AATTGATATT
ATAAATGAAG ATACTGCGAT TCCCTGCACA ACCTGCAGAT ATTGTGTAGA AGGATGTCCT
GAGAATATTG CAATACCGGA TTACTTTGCA TTATATAATA GTGCAAAGCG TGCTGTAACT
GATAGTATCT CAAGCCAGTT TGTTTACTAT CTGAATCTCA CTTCAACTCA TGGAAAGGCT
AGCGATTGCA TAGATTGTAA ACAATGTGAG AAGGCATGCC CTCAGCATCT AAAGATAACA
GAGTACTTAA AAGATGTGTC AGCAGAATTT GATGCCGGAC CGGGATTACC GACAAAATAA
|
|---|
| Protein sequence | MAKRLGFGCM RLPLLDKDDQ TSFDTEALNK LVDTFLEKGF TYFDTAYTYH GFKSEEAIRE
ALVKRHSRDE FTLATKLPPR MLKAVEDQDR IFNEQLENCG VEFFDYYLLH NIGVSAYEQA
CKYDTFGFAL KKKEEGKIKN VGMSFHDTPE LLDEILTAHP ELDFVQLQIN YIDWENPGIQ
SRRCHEVARK HNMPVVVMEP CKGGNLASVP EKAEELMKAY NPEASVASWA IRFATSQEGV
MMVLSGMNTM EQVLDNTSYM TDFKPLNEEE YRIISQVIDI INEDTAIPCT TCRYCVEGCP
ENIAIPDYFA LYNSAKRAVT DSISSQFVYY LNLTSTHGKA SDCIDCKQCE KACPQHLKIT
EYLKDVSAEF DAGPGLPTK
|
|---|
| |