| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0539 |
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| Symbol | |
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| ID | 3627098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 641390 |
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| End bp | 642199 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637699431 |
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| Product | hypothetical protein |
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| Protein accession | YP_304100 |
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| Protein GI | 73668085 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1719] Predicted hydrocarbon binding protein (contains V4R domain) |
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| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAGAG ACTTATTCAT GTTTGCAGGT TTTAATGAAA ACTCGCAGAT TGTATGGTTT
AAGATAATCT ACTCGAAAGA ACCCGGATCT CTGTCTTTAA TAACTGACTT TCTCGAAAAA
GAGAATGCGT TCATTATGTT TGGTCATCTG GATAATATTA CACAGAAAAC TGGAGAATAT
TCAGTATTTA CCGAACTTGA GAAAGATGTG GATCCAGAAA GTTTCGCCCA AAAAATAAAG
GAACTTGAAG TTGTAAATGA GGTCGAATAT GGGATTTCAG AATACGGAAT GGTTTACTCC
GTGGACTTCC CTCTAAATGT TATAGGAGTC AGGGGAGTTA TGGCAAGGGC ACTTACCATT
GTTGATATCA TTAAAACTCT CAACCAGAGT GCGCCGCATG CAGAAGGACT TCTCACTCTT
TCAGGACTTA AGGGTGGGAC TCACGCAGCA AAGTATTTCA AGAGTATTCT GGACCTTAAT
GACAGTAATT TTGCAAGCAT GCTTGCAGAA CTCTTCAAAG GTGTGGGCTG GGGAATTCTG
GAAATCGAAT GTGACCCCAA AACTTATGAA GGAAAAATCA TTGTGAAAGA CTCGTTTATA
GCTGATGTTT ACGGAGGGTC GGAACAGCCA GTTTGTGCCT ATATGAGCGG TTATTTTGCA
GGTTATCTGA CCGAATATTT CGGGAAAAAC ATAAGTGTGA GAGAGGTAAG CTGTAAAGCT
ACAGGAAAAG AAGTCTGCGA ACACATAATC TCGCCGGCGC CGTCGGGCGG TACAAGCCAG
GAATATCAGA TGAGAGGGGT GACGCGGTGA
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| Protein sequence | MVRDLFMFAG FNENSQIVWF KIIYSKEPGS LSLITDFLEK ENAFIMFGHL DNITQKTGEY
SVFTELEKDV DPESFAQKIK ELEVVNEVEY GISEYGMVYS VDFPLNVIGV RGVMARALTI
VDIIKTLNQS APHAEGLLTL SGLKGGTHAA KYFKSILDLN DSNFASMLAE LFKGVGWGIL
EIECDPKTYE GKIIVKDSFI ADVYGGSEQP VCAYMSGYFA GYLTEYFGKN ISVREVSCKA
TGKEVCEHII SPAPSGGTSQ EYQMRGVTR
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