Gene Mbar_A0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0472 
Symbol 
ID3624214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp567311 
End bp568291 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content42% 
IMG OID637699365 
Productnickel ABC transporter, ATP-binding protein 
Protein accessionYP_304034 
Protein GI73668019 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTAT TGGCGGAAAC CCAAAACATA CGAAAATCCT ACGAAAAACA AAATTTGTTT 
ACAAAAAAGA GAGAGCAGGT CTCTGCCGTA AACGGTGTGT CTCTTAAAAT TCAGAAGGGA
TGTTCAGTAG GACTTATCGG AGAGAGCGGA AGCGGAAAAA GCACGCTTGG CAGAATGATG
GTTGGGCTGG AAACGCCAAC AGAAGGACAG GCACTGTTTC GAGGACGGTC AATATCGAAT
ATTTCCCTTC GAAAAATGCG TCCATTACGA CGTAATATCC AGATGATATT TCAAAATAGC
AGCAGCGTTT TTGATACTTC CTATACTGTA GGCGAAAGTA TTGCCGAGGT TATTGAAAAC
AGTGAGAGAG TATCAAAAAA AGAATGCTTA GAAAAAATTG AGACAATATT GGAACAAGTG
GGGCTAGATG CCTTATACGC TCAGAGGAAT CCAAAGGAGC TGAGCGGAGG GCAGCGCCAG
CGTGCCAATA TTGCACGTGC GCTTGTTCTT CATCCAGAGT TTGTTGTTTG CGACGAGCCC
GTTTCTAGCC TTGATTATTC ATTGCGCAAA CAAATTCTGA CTTTACTTAA TGACTTACGA
AAAAAGTTTG GTTTAACTTA CTTGTTTATC ACTCATGACC TAAACTGTGT GCCTTATGTC
TGCGATATGA TGGCCATTAT GTATGCAGGT AAGATAGTGG AGCAAATCGA TTTAAAGAAT
GACTCGATGC AGAACGCACT TCACCCATAC ACCAGCTTAC TGCTTTCGTG TATACCAGCA
AAGGTGCCTG CAGAACGAAA AAAATGCACA ATGGAGAGCA TAATTGATAC AACAGTTATA
CCTGATTCAA AACACTGTTG TCGGTTTTTT CCACGCTGTC CTTTCTGTAC GGAACGTTGC
ATAAATGAGG AGCCATTGCT AAAGGAGGTC GCAAGCGGTC ATTTTGTAGC ATGCCATTCC
GTAGCATGTC ACATTGTATA A
 
Protein sequence
MEVLAETQNI RKSYEKQNLF TKKREQVSAV NGVSLKIQKG CSVGLIGESG SGKSTLGRMM 
VGLETPTEGQ ALFRGRSISN ISLRKMRPLR RNIQMIFQNS SSVFDTSYTV GESIAEVIEN
SERVSKKECL EKIETILEQV GLDALYAQRN PKELSGGQRQ RANIARALVL HPEFVVCDEP
VSSLDYSLRK QILTLLNDLR KKFGLTYLFI THDLNCVPYV CDMMAIMYAG KIVEQIDLKN
DSMQNALHPY TSLLLSCIPA KVPAERKKCT MESIIDTTVI PDSKHCCRFF PRCPFCTERC
INEEPLLKEV ASGHFVACHS VACHIV