Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0396 |
Symbol | |
ID | 3627031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 468919 |
End bp | 469443 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637699289 |
Product | endonuclease III |
Protein accession | YP_303959 |
Protein GI | 73667944 |
COG category | [S] Function unknown |
COG ID | [COG1833] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTT CCGAAAAAAA TGGTTCTCTG GGAAGAAACG TTTACTCTGA AAAAAATGAC TGTTCTGAAA AAGATTCTCC TGAAAAAAAT CTTTTTTCCG GAAAAGGCGT CTACTGCTTG ATATTCGAAA ACCGGGCCTG TAAGATTGAG GTCGGTAAAA AGGGAGAGTT CTCTTTCAGT CCAGGGTTTC ATATCTATGT GGGGTCAGCT CTGGGGCCAG GAGGACTTAA AAGATTACAG AGGCACATCA ACCTTTCCAG AAATCGTGAC CGAAATCCCA AATGGCATGT TGATTATCTT CATCTGAACC CTGCTTTCAG GTTAGTTTCA GCGGTTTATG CTTTTACTTC TGAGCGGCTT GAATGTGCAC TTGCCAACAG GGTAGGAAGG GATTCAGTTT CTGGTTTCGG GTGTACCGAT TGTAAGTGCA GTTCTCATCT TTTTTATAGA AACAAAAATC CTCTTCCAGA GATTACTGAA GCTTTTGAAG CTCTTGGACT TTCTGCCCTT GTGCTGGAAC TTTAA
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Protein sequence | MDFSEKNGSL GRNVYSEKND CSEKDSPEKN LFSGKGVYCL IFENRACKIE VGKKGEFSFS PGFHIYVGSA LGPGGLKRLQ RHINLSRNRD RNPKWHVDYL HLNPAFRLVS AVYAFTSERL ECALANRVGR DSVSGFGCTD CKCSSHLFYR NKNPLPEITE AFEALGLSAL VLEL
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