Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0395 |
Symbol | |
ID | 3627030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 467271 |
End bp | 468818 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637699288 |
Product | hypothetical protein |
Protein accession | YP_303958 |
Protein GI | 73667943 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACAAT TCTCTTTTAT TGCCTGCATG CCTGATATAC CCGGGGCATT GCACAGGGCA GCCGAAATTA TCACACGGTA CGAGGGAAAT ATTAACAGGA TACAGTATGA TCGCAGGATA GATTTACATA CTGTTTTCTT TGAAGTGACT GCTCTTCCGC AGGCTTATGA AAAGATTCGT GAAGAACTGG AAAAAATAGG CTATCTCCAG ACTTCCCTTC AGCCTGTAGC TTTCGTGAAG TTCCATGTCT ATCTCCCGAA CTGCCCTGGC GCTTTATTTG ACCTCCTGAA CTATATCACT TCATCGAAAT CAAGCATTAC TTTTCTTGAT TTTGATGATC GGGGACAGCA TCCTGAAAGG CTTGTTGTAG GTCTTCACAT TGAGGACCCT AATATGATAG ATGCTCTTCT GAACCAGCTC AAGTCCAGAT ACAGGCTAGA TATTTTAGAG TATGATACAA CCGGGGAGAA ACTTGATGAT ACGGTATTTT ATCTCAGGCT GGCCCAGAAG CTCAGGTCGT TTATCGGGAG TGCTGAAGAT GATTTTTTGA TGAGGTTTCT GCAGGACATT AATCATATTA CCCAGGAACT CTCAAACCTT CAGAAAGATC CGATTGAGGT TTTTGAGAAC ATTCTGAAAG TTGGGGATTA CCTTAATCGG ACGTCAGGAG ACAATTTTTA TGCCGATGTA CAGAGGGTCA GGATAAAGGA CGATATCGAA CTTTTCTGTT TTCAACCTCC ATGCGGGGGA AATATCTATC TTTTTGATAC CTCTTCTGAA AGGGTCATGA TCGACACAGG GTATGGTATT TATTTCCAGG ACATCGTGAA CATGCTCCAG TACTACGGGC TTGGAGATCT GAGCCGGCTT AAAAGGATTT ATATTACTCA TGCTGATGCC GACCATTGTG GGGCTGCTGG TTGTTTTCCG GCACCCTCCT ATCTTAATCG CGAGACTTTT CTGATTACGC GGGAAACCAG CAGAGCCTAT GGATCAAGCA ACCAGGATTG TATTTTAGAA GAGGTTTACA CGAAGATAAT TAACCTTTTT TCCAGATTTA CTCCCCCTTC AAATACGGTT CTCTTTCCCG AAGTCTCCCT CTCGGACAAA ATAATCGAAA AACGGGGCGT ATTCCCTATT ATCGCTCGAT TCCGGATCGG CGACCTGAAG TTCGAAGTTC TTGAAGGAAT GGGAGGGCAT ATGCATGGAG AAGTTTTCTA CTTCTGCCCT GAAGAGGGGC TGCTCTTTCC TGAAGATGCG GTGATCAATT TCAAAAGCTT GAGCCCTGAT AGAACTGCAT ATAATGTTCT GGCTGATTAT CTTATGACAT CGGTGAACGT TGACAGCAAA CTTGCGCGAG AAGAAAGGCA GTCCCTTCTT TCCCTAATTT CCGAGATTGA TGAACAGCTC GCCAGGAAAA ACAAAAAATG CCTTATCTGC TGTGGTCACG GTTCAATGTC CTTATTGGAT AATGGAAAAC TTATCGAGTA CAAAGGTTCG GAGAGATATG TTGCAGGGCA AAAATGTATC TCTCAAGAAA ATTTATAA
|
Protein sequence | MEQFSFIACM PDIPGALHRA AEIITRYEGN INRIQYDRRI DLHTVFFEVT ALPQAYEKIR EELEKIGYLQ TSLQPVAFVK FHVYLPNCPG ALFDLLNYIT SSKSSITFLD FDDRGQHPER LVVGLHIEDP NMIDALLNQL KSRYRLDILE YDTTGEKLDD TVFYLRLAQK LRSFIGSAED DFLMRFLQDI NHITQELSNL QKDPIEVFEN ILKVGDYLNR TSGDNFYADV QRVRIKDDIE LFCFQPPCGG NIYLFDTSSE RVMIDTGYGI YFQDIVNMLQ YYGLGDLSRL KRIYITHADA DHCGAAGCFP APSYLNRETF LITRETSRAY GSSNQDCILE EVYTKIINLF SRFTPPSNTV LFPEVSLSDK IIEKRGVFPI IARFRIGDLK FEVLEGMGGH MHGEVFYFCP EEGLLFPEDA VINFKSLSPD RTAYNVLADY LMTSVNVDSK LAREERQSLL SLISEIDEQL ARKNKKCLIC CGHGSMSLLD NGKLIEYKGS ERYVAGQKCI SQENL
|
| |