Gene Mbar_A0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0395 
Symbol 
ID3627030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp467271 
End bp468818 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content43% 
IMG OID637699288 
Producthypothetical protein 
Protein accessionYP_303958 
Protein GI73667943 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAT TCTCTTTTAT TGCCTGCATG CCTGATATAC CCGGGGCATT GCACAGGGCA 
GCCGAAATTA TCACACGGTA CGAGGGAAAT ATTAACAGGA TACAGTATGA TCGCAGGATA
GATTTACATA CTGTTTTCTT TGAAGTGACT GCTCTTCCGC AGGCTTATGA AAAGATTCGT
GAAGAACTGG AAAAAATAGG CTATCTCCAG ACTTCCCTTC AGCCTGTAGC TTTCGTGAAG
TTCCATGTCT ATCTCCCGAA CTGCCCTGGC GCTTTATTTG ACCTCCTGAA CTATATCACT
TCATCGAAAT CAAGCATTAC TTTTCTTGAT TTTGATGATC GGGGACAGCA TCCTGAAAGG
CTTGTTGTAG GTCTTCACAT TGAGGACCCT AATATGATAG ATGCTCTTCT GAACCAGCTC
AAGTCCAGAT ACAGGCTAGA TATTTTAGAG TATGATACAA CCGGGGAGAA ACTTGATGAT
ACGGTATTTT ATCTCAGGCT GGCCCAGAAG CTCAGGTCGT TTATCGGGAG TGCTGAAGAT
GATTTTTTGA TGAGGTTTCT GCAGGACATT AATCATATTA CCCAGGAACT CTCAAACCTT
CAGAAAGATC CGATTGAGGT TTTTGAGAAC ATTCTGAAAG TTGGGGATTA CCTTAATCGG
ACGTCAGGAG ACAATTTTTA TGCCGATGTA CAGAGGGTCA GGATAAAGGA CGATATCGAA
CTTTTCTGTT TTCAACCTCC ATGCGGGGGA AATATCTATC TTTTTGATAC CTCTTCTGAA
AGGGTCATGA TCGACACAGG GTATGGTATT TATTTCCAGG ACATCGTGAA CATGCTCCAG
TACTACGGGC TTGGAGATCT GAGCCGGCTT AAAAGGATTT ATATTACTCA TGCTGATGCC
GACCATTGTG GGGCTGCTGG TTGTTTTCCG GCACCCTCCT ATCTTAATCG CGAGACTTTT
CTGATTACGC GGGAAACCAG CAGAGCCTAT GGATCAAGCA ACCAGGATTG TATTTTAGAA
GAGGTTTACA CGAAGATAAT TAACCTTTTT TCCAGATTTA CTCCCCCTTC AAATACGGTT
CTCTTTCCCG AAGTCTCCCT CTCGGACAAA ATAATCGAAA AACGGGGCGT ATTCCCTATT
ATCGCTCGAT TCCGGATCGG CGACCTGAAG TTCGAAGTTC TTGAAGGAAT GGGAGGGCAT
ATGCATGGAG AAGTTTTCTA CTTCTGCCCT GAAGAGGGGC TGCTCTTTCC TGAAGATGCG
GTGATCAATT TCAAAAGCTT GAGCCCTGAT AGAACTGCAT ATAATGTTCT GGCTGATTAT
CTTATGACAT CGGTGAACGT TGACAGCAAA CTTGCGCGAG AAGAAAGGCA GTCCCTTCTT
TCCCTAATTT CCGAGATTGA TGAACAGCTC GCCAGGAAAA ACAAAAAATG CCTTATCTGC
TGTGGTCACG GTTCAATGTC CTTATTGGAT AATGGAAAAC TTATCGAGTA CAAAGGTTCG
GAGAGATATG TTGCAGGGCA AAAATGTATC TCTCAAGAAA ATTTATAA
 
Protein sequence
MEQFSFIACM PDIPGALHRA AEIITRYEGN INRIQYDRRI DLHTVFFEVT ALPQAYEKIR 
EELEKIGYLQ TSLQPVAFVK FHVYLPNCPG ALFDLLNYIT SSKSSITFLD FDDRGQHPER
LVVGLHIEDP NMIDALLNQL KSRYRLDILE YDTTGEKLDD TVFYLRLAQK LRSFIGSAED
DFLMRFLQDI NHITQELSNL QKDPIEVFEN ILKVGDYLNR TSGDNFYADV QRVRIKDDIE
LFCFQPPCGG NIYLFDTSSE RVMIDTGYGI YFQDIVNMLQ YYGLGDLSRL KRIYITHADA
DHCGAAGCFP APSYLNRETF LITRETSRAY GSSNQDCILE EVYTKIINLF SRFTPPSNTV
LFPEVSLSDK IIEKRGVFPI IARFRIGDLK FEVLEGMGGH MHGEVFYFCP EEGLLFPEDA
VINFKSLSPD RTAYNVLADY LMTSVNVDSK LAREERQSLL SLISEIDEQL ARKNKKCLIC
CGHGSMSLLD NGKLIEYKGS ERYVAGQKCI SQENL