Gene Mbar_A0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0244 
Symbol 
ID3624857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp291743 
End bp292240 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content43% 
IMG OID637699136 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_303808 
Protein GI73667793 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC CTATCATAGG CCGAATCTGG AAATTCGGAG ACGATATCGA TACAGATGTA 
ATCATTCCTG GTAAATACCT GCGGACCAAA GATATGCAGG TTTTTGCAGC TCATGCAATG
GAAGGTATTG ACCCCGAGTT TGCAAAAAAA GTAAAGCCAG GGGATGTTAT TGTAGCAGGC
AGCAATTTCG GCTGCGGCTC CTCAAGAGAA CAAGCTCCCC TTGCTTTAAA ACATGCAGGT
ATAGCTTGCA TTGTTGCAAA ATCTTTCGCA AGGATATTTT TCCGAAATGC AATCAATGTA
GGGTTACCTC TTATTGAAGC CGATATAGAG TGCCAGGAGG GCGATGAGGT CAGGGTTGAT
CTGCTAAAAG GCGAGGTTAC AGTTTCAGGT AAAGGCACAT TCAGGGGAAA TAAATTGCCG
GATTTCCTTC TCCAGATACT TGCTGACGGC GGGCTTGTAA CTCATAGAAA AAAACTCAAG
AGCAAGCAAA AAGAATAA
 
Protein sequence
MKNPIIGRIW KFGDDIDTDV IIPGKYLRTK DMQVFAAHAM EGIDPEFAKK VKPGDVIVAG 
SNFGCGSSRE QAPLALKHAG IACIVAKSFA RIFFRNAINV GLPLIEADIE CQEGDEVRVD
LLKGEVTVSG KGTFRGNKLP DFLLQILADG GLVTHRKKLK SKQKE