Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0244 |
Symbol | |
ID | 3624857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 291743 |
End bp | 292240 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637699136 |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_303808 |
Protein GI | 73667793 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACC CTATCATAGG CCGAATCTGG AAATTCGGAG ACGATATCGA TACAGATGTA ATCATTCCTG GTAAATACCT GCGGACCAAA GATATGCAGG TTTTTGCAGC TCATGCAATG GAAGGTATTG ACCCCGAGTT TGCAAAAAAA GTAAAGCCAG GGGATGTTAT TGTAGCAGGC AGCAATTTCG GCTGCGGCTC CTCAAGAGAA CAAGCTCCCC TTGCTTTAAA ACATGCAGGT ATAGCTTGCA TTGTTGCAAA ATCTTTCGCA AGGATATTTT TCCGAAATGC AATCAATGTA GGGTTACCTC TTATTGAAGC CGATATAGAG TGCCAGGAGG GCGATGAGGT CAGGGTTGAT CTGCTAAAAG GCGAGGTTAC AGTTTCAGGT AAAGGCACAT TCAGGGGAAA TAAATTGCCG GATTTCCTTC TCCAGATACT TGCTGACGGC GGGCTTGTAA CTCATAGAAA AAAACTCAAG AGCAAGCAAA AAGAATAA
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Protein sequence | MKNPIIGRIW KFGDDIDTDV IIPGKYLRTK DMQVFAAHAM EGIDPEFAKK VKPGDVIVAG SNFGCGSSRE QAPLALKHAG IACIVAKSFA RIFFRNAINV GLPLIEADIE CQEGDEVRVD LLKGEVTVSG KGTFRGNKLP DFLLQILADG GLVTHRKKLK SKQKE
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