Gene Mbar_A0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0190 
Symbol 
ID3625425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp221089 
End bp222570 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content47% 
IMG OID637699081 
Producthypothetical protein 
Protein accessionYP_303754 
Protein GI73667739 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR00284] dihydropteroate synthase-related protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TGATTGCAAC AGGGCGGCTT GCGGAAAATA CCGTCAGGAA AGCAATCGGG 
GAAAAAGCCG ATATCCTAGT AGCCGATATT GATATTGCTG CCTTTATCAC CCCTCGAAAA
CTTGTTAAAA CGTTTCAGGA AGCTGGGCTT TCGAAAGTTT ATGACCTTAT TTTGCTTCCA
GGACTTGTAG CAGGAGATTT TTCAAAAGCT TCTGAAGAAC TGGGGTGTAA AATCCGGCTT
GGGCCAAAGC ACGCCTATGA TCTTGGCTTT GTGCTCTCTT TTGCCGGAAA AATCGAATTT
TCCGAAAAAG TTCCGGCCTG CGAACTACTT GCTGATGTTC GAAAAGAGAT GGCTCTTGAG
TTAATAAAGA AAAACGAAGA AGAAGCTTCC TCCTCCTTTA CACTCAGAGG TGTAAAACTC
GGAGGAAAAG CTCGCATGAA GGTTATGGGA GAAATTGTAG GGGCTTTGGA GATGGATGCT
CCAACTCTCC AGGCAAAAAT CGAAGCTTTT ATCGCCCGGG GGGTAGATAT AATCGACCTT
GGGGCTACCC TTAATACCCT GCCGGAGCAG GCTAAAAGAG CCGTATCCAT TGCAAAAACC
ATTACAGAGA CTCCAATCAG CATAGATACC CTTGATCCTG GACTGATAAA GGAAGGAGTA
GAAGCAGGAG CAGACCTTGT CCTGAGTCTC AACAGCTCGA ACCTTGAGAC TGCAGGTCCG
ATCGTTGCCA GGGCAGGAAT TGCAGTCGTG ATAATCCCGG ACGAGGAAAG AAGTCTGGAA
AGCCTTATCT GGAATGTTGA AGCTGCCCGC AGGCTTGGAA TTGAAAAAAT TATAGCCGAT
CCTGTGCTTG ATCCCGTGGG TCACAATATA ACCGAATCCA TTGTACGCTT TCATGAGTTT
CACAGGATAT ACCCTGAGGT TCCCGTGTTC TTCGGAGTTG GCAATGTCAC TGAGCTTATG
GATGTGGATA CCATAGGAGT CAATGCCACA CTCTGTGGAA TCGGAGTAGA GGTCGGAGCA
AGCATCCTTT TTACCCCTGA GTTCAGTGAT AAGGCTCAGG GTTCAATTCT GGAATTAAAA
CGGGCTTCTG AGATGATGTT GCTTTCCGGT ATAAGAGAAA GCTCACCAAA AGATCTCGGG
CTTGATCTCC TCTGCATTAA AGAAAAACGA AGGCGTCCGG ATTCTCCTCT CCCTGAAAAT
GCGATTCAAG CCAGGCTTTC GAAAGGCTGG CGTGTAGATC CTGCAGGCCC CATCCGCATT
CGTACAGTAC TGGACAGAAT CAGTGGAAAC GGCGGATTGA TTGTAGCCGA ACACGAGAAA
GCTTCAGTTG TGGGAAAAAA TGCCAGAGAA GTTATGAACA CGTTGCTTGA ACTGAAACTC
GTCTCCCGCC TGGATCATGC CGCATATCTG GGAAGGGAAC TGGAAAAAGC CGAACTTTCT
CTGCAGTTTA ACAGAAGTTA TGCCCAGGAC GATGTGTTCT GA
 
Protein sequence
MKILIATGRL AENTVRKAIG EKADILVADI DIAAFITPRK LVKTFQEAGL SKVYDLILLP 
GLVAGDFSKA SEELGCKIRL GPKHAYDLGF VLSFAGKIEF SEKVPACELL ADVRKEMALE
LIKKNEEEAS SSFTLRGVKL GGKARMKVMG EIVGALEMDA PTLQAKIEAF IARGVDIIDL
GATLNTLPEQ AKRAVSIAKT ITETPISIDT LDPGLIKEGV EAGADLVLSL NSSNLETAGP
IVARAGIAVV IIPDEERSLE SLIWNVEAAR RLGIEKIIAD PVLDPVGHNI TESIVRFHEF
HRIYPEVPVF FGVGNVTELM DVDTIGVNAT LCGIGVEVGA SILFTPEFSD KAQGSILELK
RASEMMLLSG IRESSPKDLG LDLLCIKEKR RRPDSPLPEN AIQARLSKGW RVDPAGPIRI
RTVLDRISGN GGLIVAEHEK ASVVGKNARE VMNTLLELKL VSRLDHAAYL GRELEKAELS
LQFNRSYAQD DVF