Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0051 |
Symbol | |
ID | 3625523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 59834 |
End bp | 61033 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637698941 |
Product | hypothetical protein |
Protein accession | YP_303621 |
Protein GI | 73667606 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000151873 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00624496 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACATCCC AAAAAATAAT CTGGGATTCT ATTGAATCTC TTCACAAGTG GGTAAAAGAT CAAGCCTACT ATGGTTGGGA TCCTTATGAC GCTCTGAATA GTAAATTTAT CCTAAAACTA TGTATGGGGT CACCATCTTT AGAGATATTG GCTACCCAGA TTAATAAATA TTCTATAGTC AATTTTCGGC CGCTTCTGAG GGTGGAAAAG GGAATTGATG TAAAAGGTAT GGCACTCTTT GCCCAAGCAT ATTCAAAGAT GTATACTTTA ACAGCTGATG AAAATTACAA AAATGATCTA TTAAATTGTA TGTTGTTCCT GAAAGAAAAA TCACTTGTAT CTATTTATGG CCATGATTGT TGGGCTGGTC ATTATTATAA TTTTCGAAAT TCTGACAAAA GTATACTATC TCCTAATATA CCAGATGTGA TTACTACTTC TAATGTCATT AAAGCCGCTG TAGAAAGTTA TAAAGTTCTT AAAAGGAATG ATTTGATAAA AATGGCAAGG AGTGGGTACG AGTTTTTAAC TAATTCTCTT TTACATGAAT CAAAGGATGG ATATTTTTAT CTTGATTATG ATTCTTCAAG TGATGGTAAA ATTGTAATTA ATGCTTCTGC TGAAGGTTTG TCTGCAATAT GTAAACTTAT GCATTTGTTT GATGATAAAA ATTTGAAAGA AACGTCTTAC AATCTTGCTG AGTTTTTAAT AACAAATCAA AATACTGATG GTTCCTGGAT ATATAGCAAA TACAACAATG GGAAAATTCG GATTCAGTTA GATTTTCACC AAGGTTTTAT TATTAATTCC TTATTGGAAT ATCTTCCTTT TGCTGCTTTG AACCAAAAAG ACCGAATAAT TTCATCCATT AAAAATGGTG CCAAATTTTA TAAAGAAAAA CAGTTTTTTG AGGATGGAAC GTGTCATTTT AGATATCCTC AAAAATATCC AATTGATATC CACAATCAGG CACAGGGTAT AATCACTTTT AGTAAACTAG CTCCTTTTAA TAACGAATTT TCAAATTTTT CTCTAAAAAT TGCTTTATGG ACAATTTTAA ATATGCAAAA TAGAGCTGGT TACTTTTATT ATCAAAAGTA TAGAATTTTT AGAAATAACA TTCCTCATAT AAGATGGGGA CAGGCTTGGA TGATGTTAGC TTTAGCTACT TATTTAGAAG TAAAGGAGGA GCAAAAATGA
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Protein sequence | MTSQKIIWDS IESLHKWVKD QAYYGWDPYD ALNSKFILKL CMGSPSLEIL ATQINKYSIV NFRPLLRVEK GIDVKGMALF AQAYSKMYTL TADENYKNDL LNCMLFLKEK SLVSIYGHDC WAGHYYNFRN SDKSILSPNI PDVITTSNVI KAAVESYKVL KRNDLIKMAR SGYEFLTNSL LHESKDGYFY LDYDSSSDGK IVINASAEGL SAICKLMHLF DDKNLKETSY NLAEFLITNQ NTDGSWIYSK YNNGKIRIQL DFHQGFIINS LLEYLPFAAL NQKDRIISSI KNGAKFYKEK QFFEDGTCHF RYPQKYPIDI HNQAQGIITF SKLAPFNNEF SNFSLKIALW TILNMQNRAG YFYYQKYRIF RNNIPHIRWG QAWMMLALAT YLEVKEEQK
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