Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0025 |
Symbol | |
ID | 3627284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 29515 |
End bp | 30834 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637698916 |
Product | hypothetical protein |
Protein accession | YP_303596 |
Protein GI | 73667581 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000686013 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00952871 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAAAGA ACTACAGTTT GGCAAAAGAT GGAATATCTG TTTTTGGAAC TCAATTGTTT ATTTTAATTG TAAGTTTCAT TTCAGGAGTA ATACTTGCGA GAGAACTTGG ACCTTCAGGG AAAGGAATCT TTTCTGCTCT TTTAGTTTAT CCGGGAATAC TAATTAGTCT TTTAAGTATG GGAATGCGTC AGGCAACTGT TTATTATCTT GGTACAAAAA AATACTCGGA ATCAGACATT GTAGGTGTAA CGTTATTATT ACTTATTTTA TCAAGCGCAA TTGGAGTTTT AACTTCAATT GTAATAATCT CGTATACTAA AAACCCAGAT TATAATCAAA TGCTAATATT ACTTGCGTCA TTTACAGTTC CTGCAGATCT TACTATTAAT TATTTTACTG GGATTTTAAT TGGCAAACAG CGAATAAATA AATTTAACCA AATAAAATAT TTGGTTCCTA TAATTAATTT TGTACTTATC ATCTTTTTAG TATTTTTTGA GAATTTATAT GTGTTAGGTG CGATTTTGGC CACACTTGTT GCCCGAATTA TGCTTGCTTT ATATGCCTTA TTAATGATCA AGAGAGAATA TTCTTTAAAA ATATGCTGTT CACCCGAAAT AATCAAAAAA ATGTTTTCTC TAGGATTTAT CTATGCACTT TCACTGTTTG TCCTGAATCT TAATTATAGA GTGGACATAA TTATACTTGA ACGTTTAAGT AATATTGCAG AAGTAGGTCA ATATTCAATA GGAGTTGGTT TTGCTGAATT ATTATGGCAG CTACCGACTG CTTTTGGGGT AGTTATTTTT TCATATAGTG CAAACGCAAA GGATTCAAAT AAATTCTCTC AAGATATTGC AAAAATGATA AGGATTATTT TCCCTATTGT CTTGTTTGGG TCATTATTTT TATATTTTGC TAGTGGGTAT ATAATCCCTT TTTTGAATGG AGACGAATAT ATCCCAAGTG TCAAGATGCT AAAAATATTA TTACCTGGAA TAGTTATAAT GAGTCTTTTT AAAATTATTA ATATGGATTT GGCTGGCAGA GGAAAACCTG ATATTACTCT AAAAATTTTT TCCCCAGCCG TTTTGATCAA TATAGTGCTT AATATAATTT TAATACCAGA TTATGGTGGT TGTGGTGCAG CCTTAGCTTC AACCGTTAGT TATACGCTTG CATCAGTATC CATTTTGTAT TACTATATGA AAATTACTCA ATTAAGTTTA AGTGACATAT TTATTTGTAA AAAAAGTGAT ATCAATTTTA TTTTAGGATT GATTCATGCA CCACCAATCA AGCGTAAGAG AATCACCTAA
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Protein sequence | MVKNYSLAKD GISVFGTQLF ILIVSFISGV ILARELGPSG KGIFSALLVY PGILISLLSM GMRQATVYYL GTKKYSESDI VGVTLLLLIL SSAIGVLTSI VIISYTKNPD YNQMLILLAS FTVPADLTIN YFTGILIGKQ RINKFNQIKY LVPIINFVLI IFLVFFENLY VLGAILATLV ARIMLALYAL LMIKREYSLK ICCSPEIIKK MFSLGFIYAL SLFVLNLNYR VDIIILERLS NIAEVGQYSI GVGFAELLWQ LPTAFGVVIF SYSANAKDSN KFSQDIAKMI RIIFPIVLFG SLFLYFASGY IIPFLNGDEY IPSVKMLKIL LPGIVIMSLF KIINMDLAGR GKPDITLKIF SPAVLINIVL NIILIPDYGG CGAALASTVS YTLASVSILY YYMKITQLSL SDIFICKKSD INFILGLIHA PPIKRKRIT
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