Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0022 |
Symbol | |
ID | 3627281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 26763 |
End bp | 28019 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637698914 |
Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
Protein accession | YP_303594 |
Protein GI | 73667579 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00149727 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0105744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCAG AAAAATGTGA ATATATAGTC AGACCATCCA GGCTTCAAGG GAAAGTAAAA GTAAGTGGTG CAAAAAATAG TGCTTTACGT CTTCTTGCAG CTTCATTGCT AACGGATGAG AAAATAGAAC TGACAAATTA CCCCGCTAAT TTACTCGATG CTCAAATTCA TGTTGGTATG TTGGAAGCTC TTGGAAAAAA ATGTGTCGTA GAGGATGAAA AAATAACCAT TTACGAGGAA AAAGCTCCTT TGAAAATTCT TAATTGGAAC AAGCGCTCAA TTCGTAATAC TTTACTTATA TTAGGTGCAC TGGTAAGTCG CATAGGTGAA GCAAAGGTTC CTCTTCCAGG AGGTTGTAAT CTTGGAGAAA GAAAATTTGA TCTACACGAA ATGCTTCTCA GAAACATGGG AGCAAAAGTT TGGATTGAAG ATAATATGCT TTGTGCTAAA GCAGAAAATG GACTAAAAGG GGCTGACATT TTTTTACCTA TCCGTTCAAC AGGCGCGACT GAAAATTCAA TGATCTGTGG ATCTTTAGCT GAAGGTATAA CCAGAGTTTG GAATCCTCAT ATTCAACCCG AAATTCTTGA TTTGGCGCGT TTTCTTAATG AGATGGGTGC GAAGATCGAG ATTTTTGGCC AGGAACATAT AAAAATTACT GGAGTGAAAA AATTATTTGG GACTAGACAT TCTGTAATTG CTGATAATAT CGAAGCGGTC ACGTGGCTAA TTGCTTCAGT GATTACGGGT GGAGATATCG AGATCATTGA TTTTCCCTTC AAGGACGTTG AAGTTACGCT AATACATCTT CGTCAAAGCG GAGCGAAGTA TTATCTTGGA GACAACAGTC TTATTGTAAG AGGGGGAACC CCCTATCCTG TAGAGATTAG TACTGGTCCA TATCCCGAAA TCAAATCGGA TGTTCAACCT CTATTTGCAG TTTATGGTGC CTGTGCAAAA GGTAGTTCAA AAATTGTTGA CTTACGTTTC CCTGGTAGAT ATTGTTATAC AAGTGAACTA GCCAAAATGG GCTTGCAATA TAATATCAAT GGTAATATAT TGGAAATCAT CGGTGGAAAT CCCCTTAATG GTGCTCAAGT AAGAGCTCTT GATCTCCGAG CTGGTATTGC ATTAGCGTTA GCTGGACTGG TGGCAAAAGG TGAGACCCGG ATCTTAGATG CCTGGCAGAT TGAAAGAGGG TATGATAATT TTGTAGAAAA ATTAATTTCA TTGGGGGGAA ATATAAGATA TGGATAA
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Protein sequence | MNPEKCEYIV RPSRLQGKVK VSGAKNSALR LLAASLLTDE KIELTNYPAN LLDAQIHVGM LEALGKKCVV EDEKITIYEE KAPLKILNWN KRSIRNTLLI LGALVSRIGE AKVPLPGGCN LGERKFDLHE MLLRNMGAKV WIEDNMLCAK AENGLKGADI FLPIRSTGAT ENSMICGSLA EGITRVWNPH IQPEILDLAR FLNEMGAKIE IFGQEHIKIT GVKKLFGTRH SVIADNIEAV TWLIASVITG GDIEIIDFPF KDVEVTLIHL RQSGAKYYLG DNSLIVRGGT PYPVEISTGP YPEIKSDVQP LFAVYGACAK GSSKIVDLRF PGRYCYTSEL AKMGLQYNIN GNILEIIGGN PLNGAQVRAL DLRAGIALAL AGLVAKGETR ILDAWQIERG YDNFVEKLIS LGGNIRYG
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