Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_3494 |
Symbol | |
ID | 4657248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 3862815 |
End bp | 3865925 |
Gene Length | 3111 bp |
Protein Length | 1036 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639813473 |
Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
Protein accession | YP_960752 |
Protein GI | 120556401 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGAT TTTTTATCGA ACGCCCCATA TTTGCCTGGG TCGTCGCCCT GATGCTGATG CTCGGCGGCG GACTGGCAGT AAAGAACCTC GCCGTTAACC AGTTTCCGGA TGTCGCCCCG CCGGCGATTG CCTTGTCGGT GAATTACCCC GGCGCTTCCG CCCAGACCGT GCAGGACACG GTGGTCCAGG TGATCGAGCA ACAGCTCAAC GGCCTGGACG GCTTGCGCTA CATCTCCTCC GAGAGCAACT CGGATGGCAG CATGACCATC ATTGCCACCT TCGAACAGGG CACCGACCCA GACATCGCCC AGGTGCAGGT GCAAAACAAA CTGCAGCTGG CCAACCCGCT GCTGCCCGAA GAAGTGCAGC GTCAAGGCAT CCGGGTGTCT AAGTACAAGG TGAACTTCTT CACCGTATTT GCGCTGACCA GCCCTGATGG CAAGTACACC CAGGGCGACC TGGCCGATTA CATCGTGTCC AATATCCAGG ACCCGGTTGC GCGAACCCAG GGCGTCGGTG ACTTTCTGCT GTTCGGCTCC CAGTACGCCA TGCGCCTGTG GCTCGACCCG GAAAAACTCA ACAGCTACCA GCTGACCCCG CAGGACGTGA TCAATTCGGT GCGCGCCCAG AACGTGCAGG TCTCTGCCGG CCAGCTCGGT GGCCTGCCCA CCGCAGAAGG CGTGCAGCTG CAGGCCACCG TTATCGGCAA GCAGCGCATG AAGACCGCCG AAGAATTCGA AAACATCCTG CTGAAAGTGA ACCCGGACGG CTCCCAGGTG CGCCTGGCCG ATGTCGCCGA GGTGAATCTG GGCAACGAGA ACTACGCCAC CACCGGTAAA TACAACGGCG CGCCGGCAGC CGGTATGGCC CTGCGCCTGG CCACCGGCGC CAACCAGCTG GAAACCGCTG GCCGGGTAAA AGAAACCCTG GCAGAACTGG AACGCTTTCT GCCTGAAGGC GTAGAGATCG TCTTCCCCTA CGACACCACA CCGGTCGTGT CGGCGTCTAT CGAGACCGTC GCCATGACCC TGATCGAAGC CGTGGTGCTG GTGTTCCTGG TGATGTTCCT GTTCCTGCAA AGCTGGCGCG CCACCATCAT TCCCACACTG GCGGTGCCGG TGGTTCTGCT GGCTACCTTT GGCGTACTGT ACGCCTTTGG CTTCACCGTC AACGTGATGA CCATGTTTGC CATGGTCCTG GCCATCGGTT TGCTGGTGGA CGACGCCATC GTAGTGGTGG AAAACGTCGA GCGACTGATG GAAGAAGAGG GGCTGTCGCC CAAGGAAGCC GCCAAGAAAT CCATGGACCA GATCTCCGGC GCACTGCTGG GCATCGGCCT GGTGATTTCG GCGGTGTTCC TGCCCATGGC CTTTTTTGGC GGCTCCACCG GGGTGATCTA CCGGCAGTTC TCGGTCACCA TCATCTCGGC AATGTCGTTC TCTGTGCTGG TGGCATTTAT TTTCACCCCG GCCCTGTGCG CCACCTTGCT GAAACCCGGC GACCAGCACG TCAGGAAAGG CTTTTTCGGC TGGTTTAACC GCACCTTTGA CCGCAGCGCA GACCGCTACA AATCAGGCGT CAGTTACCTG ATCAAACGTA AGGGCCGCTT TATGGGCGTG TACCTGTTGC TGGTCGTGGC TGTGGGCTTC CTGTTCAAGG GCCTGCCCAC CGCATTCCTG CCGGACGAAG ATCAGGGCGT GATGATTGTG ATGGTGCAGC TGCCCACCAA TGCCACGGGC GAGCGCACCG AAGCCGTACT GGCAGAAGCT GGAAATTATT TGCTGGAAGA AGAGTCCGAG GTGGTCAAGA GCGTGATGTC TGTGCGGGGC TTCAACTTCG CCGGCCGTGG CCAGAACTCC GGTATTCTGT TCGTGGACCT GAAGCCCTTT GCTGACCGGG AAAGCTTTGC CCAGAGCGTG TTCGCCCTCG CGGGCCGCTC CGGGGCAAGG TTCGCCCAGA TCAAAGACGC CATCGTGTTC CCGATTGTGC CACCGGCCAT TCTGGAGCTC GGCAACGCCA CCGGCTTTGA CCTCTACCTG AAAGACAACG GAGCTATCGG CCACCACGCC CTGATGGCCG CCACCAATGA GTTTATCAGC AGAGCCAATG CCGCGCCGGA GCTGAACATG GTGCGCCACA ACGGCCTGCC GGACGAGCCC CAATACCAGG TGATCATCGA TGACGAAAAA GCCCGGCTGT TGCAGGTGTC CATTGCCGAC ATCAATGCCA CCATGTCTGC CGCCTGGGGT TCAAGCTATG TGAACGACTT CCTGCACAAC GGCCGGGTGA AGAAAGTCTA TGTGCAGGGC AAACCGGATT CACGACTGGC ACCGGAAGAC TTCGACAAAT GGTTTGTGCG CAACGCCCAG GGTGAGATGG TGCCCTTTGC CGCCTTTGCC ACTGGCGAGT GGGTGTTCGG TTCGCCGCGC CTGCAGCGGT ATCAGGGCTT ACCCGCTACG CAAATCCAGG GTGCTCCGGC TAACGGTTAC AGTACCGGTG ATGCCATGGC CGCACTGGAA CGCATTGCCG CCGACCTGCC CCAGGGCCTG GGCCTGGAAT ACACCGGCCT GTCGTTCGAG GAAAAACAGG CCGGCAACCA GGCGATGATG CTGTATCTGC TGTCGATCCT GGTGGTGTTC CTGTGCCTGG CAGCCCTGTA TGAAAGCTGG TCGATTCCGT TTGCGGTGAT CATGCTGGTG CCACTGGGCG TGCTTGGCGC GGTCCTGGCC ACCATGGCCA GAGGGCTGTC CAACGATGTG TTCTTCCAGG TGGGTATGCT GACTACCATG GGGCTGGCCG CCAAGAACGC CATCCTGATC GTGGAGTTCG CCCGCCAGCT CTATGAGCAG GAAGGCAAGC CGCTGCTGCA GGCCACCGCC GAGGCCGCCC GGCTGCGCCT GAGGCCGATC ATCATGACCT CGCTGGCGTT CATCTTCGGG GTACTGCCCA TGGCCATCGC CAGCGGTGCC TCCAGCGCCA GCCAGCATGC CATCGGCACC GCGGTGGTCG GCGGCACACT GGCCGCGACC ATCCTGGCGA TCTTCTTTGT ACCGCTGTTC TACGTGTTTG TGGTGGGCCT GACCGGAAAG CGGAAATCCG CTGACGATTA A
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Protein sequence | MPRFFIERPI FAWVVALMLM LGGGLAVKNL AVNQFPDVAP PAIALSVNYP GASAQTVQDT VVQVIEQQLN GLDGLRYISS ESNSDGSMTI IATFEQGTDP DIAQVQVQNK LQLANPLLPE EVQRQGIRVS KYKVNFFTVF ALTSPDGKYT QGDLADYIVS NIQDPVARTQ GVGDFLLFGS QYAMRLWLDP EKLNSYQLTP QDVINSVRAQ NVQVSAGQLG GLPTAEGVQL QATVIGKQRM KTAEEFENIL LKVNPDGSQV RLADVAEVNL GNENYATTGK YNGAPAAGMA LRLATGANQL ETAGRVKETL AELERFLPEG VEIVFPYDTT PVVSASIETV AMTLIEAVVL VFLVMFLFLQ SWRATIIPTL AVPVVLLATF GVLYAFGFTV NVMTMFAMVL AIGLLVDDAI VVVENVERLM EEEGLSPKEA AKKSMDQISG ALLGIGLVIS AVFLPMAFFG GSTGVIYRQF SVTIISAMSF SVLVAFIFTP ALCATLLKPG DQHVRKGFFG WFNRTFDRSA DRYKSGVSYL IKRKGRFMGV YLLLVVAVGF LFKGLPTAFL PDEDQGVMIV MVQLPTNATG ERTEAVLAEA GNYLLEEESE VVKSVMSVRG FNFAGRGQNS GILFVDLKPF ADRESFAQSV FALAGRSGAR FAQIKDAIVF PIVPPAILEL GNATGFDLYL KDNGAIGHHA LMAATNEFIS RANAAPELNM VRHNGLPDEP QYQVIIDDEK ARLLQVSIAD INATMSAAWG SSYVNDFLHN GRVKKVYVQG KPDSRLAPED FDKWFVRNAQ GEMVPFAAFA TGEWVFGSPR LQRYQGLPAT QIQGAPANGY STGDAMAALE RIAADLPQGL GLEYTGLSFE EKQAGNQAMM LYLLSILVVF LCLAALYESW SIPFAVIMLV PLGVLGAVLA TMARGLSNDV FFQVGMLTTM GLAAKNAILI VEFARQLYEQ EGKPLLQATA EAARLRLRPI IMTSLAFIFG VLPMAIASGA SSASQHAIGT AVVGGTLAAT ILAIFFVPLF YVFVVGLTGK RKSADD
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