Gene Maqu_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_3233 
Symbol 
ID4654039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand- 
Start bp3579291 
End bp3579953 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content48% 
IMG OID639813211 
Productanti-ECFsigma factor, ChrR 
Protein accessionYP_960491 
Protein GI120556140 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.741075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATAC GAATAAATGC AGATTTTTCA CAACGCATCG TGGTTCAACC TGGTGACTAT 
CACTGGGTTG AATCCCCGAT GCCGGGTGTG CAACGAATGA TGCTCGATAG GGTGGGTGGC 
GAAACTGCAC GTGCCACATC GATCGTTCGC TATGAGCCTT TTAGTGAGTT CTCGCCACAT 
ATTCATTCCG GTGGAGAAGA GTTTTTCGTG CTTGAAGGCG TGTTCTCTGA TGAGCATCAA 
TGCTATGGCA AAGGCAGTTA TGTACGCAAC CCTATTGGCT CATCACACAC CCCTAAAATC 
GGTAAGGAGG GGGCGACTAT TTTCGTTAAA TTGCAGCAGT TCGACGAAAA AGATACAGAG 
CAAAAGGTGA TCGATACTCA AACGCAACCA TGGTTTCAGG GGCTAGTCGG TGGCCTAAAA 
GTGATGCCAT TGCATGAGTT TGAAAGTGAA CACGTCGCTT TGGTGAAGTG GGCGCCAAAC 
ACACAATTTA CTGCTCATCA GCATTGGGGT GGAGAAGAAA TTTTTGTGTT AGAGGGTACT 
TTCCATGATG AGCATGGACG CTACCCTAAA GGCTCATGGC TACGTAGCCC TCATCTAAGT 
CGGCATAGTC CCTTCACCAA AGAAGAGGGG GCTTTGATTT ACGTAAAGAC GGGGCATCTG 
TAA
 
Protein sequence
MTIRINADFS QRIVVQPGDY HWVESPMPGV QRMMLDRVGG ETARATSIVR YEPFSEFSPH 
IHSGGEEFFV LEGVFSDEHQ CYGKGSYVRN PIGSSHTPKI GKEGATIFVK LQQFDEKDTE 
QKVIDTQTQP WFQGLVGGLK VMPLHEFESE HVALVKWAPN TQFTAHQHWG GEEIFVLEGT 
FHDEHGRYPK GSWLRSPHLS RHSPFTKEEG ALIYVKTGHL