Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_2463 |
Symbol | |
ID | 4656943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 2750772 |
End bp | 2752625 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639812437 |
Product | LppC family lipoprotein |
Protein accession | YP_959725 |
Protein GI | 120555374 |
COG category | [R] General function prediction only |
COG ID | [COG3107] Putative lipoprotein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.36704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAATC GCTTCCGTCA CAGCCCAATT CTGGCCCTGA TCACCCTCGT TCTGTTCTAT CTGGGCGGCT GCGCCACCGT CAATCTCGAT GAACATATGG CACAAAGCCC GGAGCAGGCA CTGTCACTGG CCAGCGATGA ACGTGATCCG GTGGTTGGCC AACGCTATCT ATTAAGGGTG GCCAGCCGAT TCCAGGATCA AGGCCGCCAC GAAGATGCCC GAGTCATTCT CCAGGCCCCT GCTCTGGAAA ATGCTCCGGA GGACATCGCC AGACAACGCT TACTATTGTC CATGGCCAGT GCCAGCGAGT TACAGGACGG CCAATGGGCT GAGCAACTCG CCACAGATAG CACCCCAGAA AGCTTTCTTG CCTACCCCGC GGAGTTAATG TCCCGGGCAG CCATGCTGCA GGCCCGGACC TATGAGCTGG CCGGACAACC TTTGGACGGG GCACTGACGT TGATCCTGCT CAGTCAGACC GACTCCAGCA CTTCCCCGCA GGAGGTGCAT AATCGCATTT GGCAATTGCT CAAGCCCATC AATCGCTCAA CCCTGCAATC CGCCTCCAAC AACGCTCTCG GATTCGAGGT TCAAGGCTGG CTTGAGCTCG CCCTGCGCCT ACGCACCAAA GGGGCCAGCC TGGATGATCA GGGGCGTCTG ATCCGGCAAT GGCAGAATAA CTGGCCGGGA CACCCCGCAG CACAGGTACT CCCCATGGAT CTCGCCCTGC TGGCTGAACT AGCAGCAAGC CGGCCGGAGA AACTGGCATT GGCGGTTCCA CTTCAAGGTG CCCTCGCCAG TGCCGGCAAA GCGATTCGCG ACGGTTTCCT GGCCGCCTAT TATCAGGATG AAACCACTGA CCGCAGCAAA ACCGATATTC GGGTCATCGA CACCTCCACC GGCTCTTTTT CCGAGCTCTA CGAGGAACTC TCCAATAACG ACATTGATTT GATTGTTGGC CCACTGGACA AGGAAGCACT GTCCCAGCTC GCTAACATGA ACACGCTGCC GGTTCCGGCA CTGGGCCTGA ACTACCTTGG CCCGGATGCC CGCATTCCGG ACGGCCTTTA TCAGTTCGGG CTATCTGCCG AAGATGAGGC ACGACAGATC GCCGACAGGC TCGATGCCGA GAACATCGAG CAGGTTCTCG TACTGATTCC CCACGGCGAA TGGGGAGACC GGGTTGAAAC CGCCCTGCAA ACGAGGATGG ACCAGCTCGG GTTGCGAGCG CTCGACGTCG AGCGCTTTTT CCCGGAAGAC AACCTGCGCT CAGTGACAGC TGACCTGCTG GGCATTACCG CCTCCCGCCA GCGCGCCATT CAGGTGGAGC GAACAATTGG CCTGAATGTG GAATTTGAAC CCCGCCGCCG CCAGGATGCC GAGGGCATCG TGCTGGTTGC CGCACCCACG GTTGCCCGCC AGTTCAAGCC ACTGTTCGCC TTCTATTATG GCGGCGATCT GCCGGTATAC TCACCTTCCA TCGTGTACGA GGGTACGCCG AATCCGGGCC GGGACCGAGA TATTGACCGA GTTTTCTTTA CGGACATCCC CTGGGTATTG GCCGAGACGA ATCCCCTGCG GGAAGAATCA CGCCAGTATC TGAGTGGCAC CACCGGGCAA CTGGGGCGCC TTTTCGCCAT GGGCGCCGAC GCCTGGCAAC TGAGCAAGCG CTTGCCACTT CTACGCCAGG TTGAAGATGC CGCCATTGAA GGACAAACCG GCATTCTGAC CATGGATCCT GACGGCAGCA TTCATCGCGA ACAACGCTGG GCACAATTCC AGGGGGGAAC ACCCAAACTG CTTTCTCCGA CCGCTCCCCG GGAAGGTGAA CCCGCCCCGA CTGCAAACAA CTGA
|
Protein sequence | MTNRFRHSPI LALITLVLFY LGGCATVNLD EHMAQSPEQA LSLASDERDP VVGQRYLLRV ASRFQDQGRH EDARVILQAP ALENAPEDIA RQRLLLSMAS ASELQDGQWA EQLATDSTPE SFLAYPAELM SRAAMLQART YELAGQPLDG ALTLILLSQT DSSTSPQEVH NRIWQLLKPI NRSTLQSASN NALGFEVQGW LELALRLRTK GASLDDQGRL IRQWQNNWPG HPAAQVLPMD LALLAELAAS RPEKLALAVP LQGALASAGK AIRDGFLAAY YQDETTDRSK TDIRVIDTST GSFSELYEEL SNNDIDLIVG PLDKEALSQL ANMNTLPVPA LGLNYLGPDA RIPDGLYQFG LSAEDEARQI ADRLDAENIE QVLVLIPHGE WGDRVETALQ TRMDQLGLRA LDVERFFPED NLRSVTADLL GITASRQRAI QVERTIGLNV EFEPRRRQDA EGIVLVAAPT VARQFKPLFA FYYGGDLPVY SPSIVYEGTP NPGRDRDIDR VFFTDIPWVL AETNPLREES RQYLSGTTGQ LGRLFAMGAD AWQLSKRLPL LRQVEDAAIE GQTGILTMDP DGSIHREQRW AQFQGGTPKL LSPTAPREGE PAPTANN
|
| |