Gene Maqu_2245 details

Gene Information

• Locus tag: Maqu_2245
• Symbol: rnc
• ID: 4654885
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: -
• Start bp: 2516619
• End bp: 2517308
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639812220
• Product: ribonuclease III
• Protein accession: YP_959511
• Protein GI: 120555160
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTTCAC AACCAGACCT AGACCAACTT CAGCGCCGCA TTGGCTACCA GTTCAAGGAA 
CCGGAGCGGC TTCTGCTGGC GCTGACCCAT CGCAGTTTTG GCAACCAGAA TAACGAACGT 
CTTGAGTTTC TGGGCGATTC TATCGTGAAC ATGGTGATCG CCGAATATCT GTATCTTCAT 
TTCGAGAAGG CCCGGGAAGG GCAGTTGAGC CGGCTTCGGG CCCGTATGGT CAAGGGGGTT 
ACCCTCGCCG AGATCGGTCG TGAATTTCAG TTGGGCCAGT ATCTGAGGCT CGGTTCGGGA 
GAGCTGAAAA GTGGTGGTTT CCGCCGTGAG TCCATACTCG CCGATGCCGT GGAATCCATT 
ATCGGGGCCA TTTATCTGGA CAGCGACTTT CATACCTGTC GGGCTCAGGT GTTACGCTGG 
TTTGAACAGC GCTTGGCAAA CCTGGATATT CAGGACACCC AGAAAGATCC GAAAACCCGG 
TTGCAGGAGT ACCTGCAGTC CAGGCAATTT CCGTTGCCGC GCTATGAAGT AATTTCTGTT 
GACGGCGAGG CCCACAACCA GACTTTCCAT GTCTCCTGCG CCTTGCCCTC GCTGGACCGT 
AAAACCACCG GCACTGGCAG TAGTCGACGT GTTGCTGAAC AGCAGGCCGC CCGAAATGCA 
CTCAAGCAAC TGGGTGTGGA GAATTCCTGA 

 

Protein sequence

MSSQPDLDQL QRRIGYQFKE PERLLLALTH RSFGNQNNER LEFLGDSIVN MVIAEYLYLH 
FEKAREGQLS RLRARMVKGV TLAEIGREFQ LGQYLRLGSG ELKSGGFRRE SILADAVESI 
IGAIYLDSDF HTCRAQVLRW FEQRLANLDI QDTQKDPKTR LQEYLQSRQF PLPRYEVISV 
DGEAHNQTFH VSCALPSLDR KTTGTGSSRR VAEQQAARNA LKQLGVENS