| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2197 |
|---|
| Symbol | |
|---|
| ID | 4657489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2459970 |
|---|
| End bp | 2461010 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639812172 |
|---|
| Product | beta-Ig-H3/fasciclin |
|---|
| Protein accession | YP_959463 |
|---|
| Protein GI | 120555112 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA AATACGCTTT ACCCATGGTT TTAGCGGGCA GTGTCATGCT ATCCGGTTGT
TGGCTTGATG ACGATGATAA CGACGATAAC GGCACTACCG AGGCTGCCAC GCAAAGCATC
CTGGAAATCG CTGTTGAGAA TGCAAACACG ACGATTCTGG AAGCTGCCGT TCTTGAGGCC
GATCCATCCA TCGCGGAACT GCTCGGTGGC GATGACCAGT TAACGGTGTT CGCACCGACA
GATGCGGCCT TTGAAGCCCT GTTGGACGAC TTGGGACTCA CGGCGGAAGA GTTGTTAGCC
AACACAGAGT TATTAAACAC AGTTCTTACC TACCATGTCC TTGCAACGTC TGTGGGTGAA
GTGAAGGCTG CCGCTGCGAT CAGCGTCGCG CAAAGCCCGG TCCCACAAAA CCTCGTTCCA
ACCGTGAATG GTGAAAACGT CGCGCTGTCC ATTTCACAGG AAAACGGAGA AGACGTGCTG
TACGTCAACA CGTCTCGAGT GACGGGGCCT GATGTCGACG CGACGAATGG TGTTATTCAC
CTTATTGACA AAGTGCTGCT TCCGCCTCCG AGCGATCTCA GTGATACAGA TGCAACAATC
GGGGCTATCG TGACGGCGCT TGCAGAGGCT GGAGAAGGTG CCGAGTTTAC AACGCTTTTG
GCGGCACTTA AGACTGGTGG CGCTTCCGAG TTGCTAGCGG CAGCTTTGAA TGAGAATGCG
ACTCTAACTG TGTTCGCGCC GACAGATGAT GCTTTTGGGG ATTTACTATC GGAATTGAAT
CTCACACCAG AGCAGTTGCT GGCAGATGAA AATCTGCCGA CAGTTCTAGA GCAACATATT
ATTGTCGGCA GTTCGGTCGG TTCTCTCACT GCATACGCTT CGAACGGCGG TACAGTACCT
AACTTGGCTG GCACCACTTT GAACGTTGAC ATCCAAAACA ACGCTTTGAT TATCGAGGGG
AGTACCGTCA TCGAAGCCGA TGTTGAAGCG TCGAACGGCG TGATTCATGT GATTGATAAG
GTGATTTATA CCGTCGACTA G
|
|---|
| Protein sequence | MKAKYALPMV LAGSVMLSGC WLDDDDNDDN GTTEAATQSI LEIAVENANT TILEAAVLEA
DPSIAELLGG DDQLTVFAPT DAAFEALLDD LGLTAEELLA NTELLNTVLT YHVLATSVGE
VKAAAAISVA QSPVPQNLVP TVNGENVALS ISQENGEDVL YVNTSRVTGP DVDATNGVIH
LIDKVLLPPP SDLSDTDATI GAIVTALAEA GEGAEFTTLL AALKTGGASE LLAAALNENA
TLTVFAPTDD AFGDLLSELN LTPEQLLADE NLPTVLEQHI IVGSSVGSLT AYASNGGTVP
NLAGTTLNVD IQNNALIIEG STVIEADVEA SNGVIHVIDK VIYTVD
|
|---|
| |