Gene Maqu_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_2138 
Symbol 
ID4656488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp2398640 
End bp2399458 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content59% 
IMG OID639812113 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_959404 
Protein GI120555053 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAGGT TAAAAGCCCC CGGTTTCTCG AAGACCATGC TGATGCTGGG CATGCTGTTC 
CTGTATCTGC CCATGGTGGT GCTGATCGTA TACTCGTTCA ACGCCTCACG GTTGGTATCG
GTATGGGCCG GGTTCTCCAC CAAATGGTAC GGCGCCCTGC TCGCCAACGA ACAGATCCTG
TCGGCGGTGT GGATGAGCCT GCGCATTGCC TTCTATTCCG CCAGCATGGC GGTGTGTTTG
GGCACCCTGT GCGCGTTCGT GATCACCCGG TTCAAAAAGA TGCGCGGGCG CACGTTGCTG
TCCAGCATGA TCACCGCCCC TCTGGTAATG CCAGAGGTGA TCACCGGCCT GTCATTGTTG
CTGCTGTTTG TGCAAATGGC CCAACTGATC GGCTGGCCGA CGGATCGTGG CATGGCCACC
ATCTGGATTG CCCATACCAC CTTCTGCAGC GCCTACGTGG CTGTGGTGGT GAGTGCCCGC
CTGAGAGAAG TGGATCGTTC CATTGAGGAA GCCGCCATGG ATCTGGGCTG CACGCCGCTG
AAAACCTTCT TTGTCATCAC CCTGCCGGTC ATCGCTCCGG CACTGGTTTC CGGCTGGCTG
CTGGCATTTA CCCTGTCGCT GGACGACCTG GTAATTGCCA GCTTTGTGTC TGGCCCGGGA
GCCACCACCT TGCCGATGGT GGTGTTCTCC TCCGTTCGGA TGGGAGTGTC ACCGGAGATC
AACGCACTGG CGACGCTGAT TATCGCGGCG GTGTCTGTGA TTGCGTTTAT CGCCTGGCTC
TGGCTGCGGC GAGCAGACAA GCGACGAACC AGGGCCTGA
 
Protein sequence
MVRLKAPGFS KTMLMLGMLF LYLPMVVLIV YSFNASRLVS VWAGFSTKWY GALLANEQIL 
SAVWMSLRIA FYSASMAVCL GTLCAFVITR FKKMRGRTLL SSMITAPLVM PEVITGLSLL
LLFVQMAQLI GWPTDRGMAT IWIAHTTFCS AYVAVVVSAR LREVDRSIEE AAMDLGCTPL
KTFFVITLPV IAPALVSGWL LAFTLSLDDL VIASFVSGPG ATTLPMVVFS SVRMGVSPEI
NALATLIIAA VSVIAFIAWL WLRRADKRRT RA