Gene Maqu_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_1180 
Symbol 
ID4654398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand- 
Start bp1345224 
End bp1345892 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content58% 
IMG OID639811146 
Productanti-ECFsigma factor, ChrR 
Protein accessionYP_958458 
Protein GI120554107 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.700022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAACA TGGACTTTTC CCGGCGCGTT GTTATTCGCA CCCACGAACA GCACTGGGTG 
CCCAGCCCCG CCGCTGGCGT TGAGCGCAAA CCACTGGCCC GAGAGGAAGC GGAACGGGGC 
CACGCCACCA GCGTTGTACG CTATAAGCCC GGTTCCTCCT TCTCTACCCA CGAACACCCT 
CTGGGCGAAG AGATTCTGGT GCTTGAAGGC GTTTTTTCCG ACGAGACCGG CCACTATCCG 
GCCGGCACCT ACATCCGGAA CCCTCCGGGC AGCAGTCACG CACCGTTCAG TGAAGAGGGC 
TGCACCCTGC TGGTCAAACT CCATCAGTTC GACCCGAGAG ATACCGCGAC GGTCAGAATC 
GATACCAATT CCGGCCACTG GCTACCCGGC ATTGGCGGCT TACAGGTTAT GCCTTTGCAC 
GAATTCGAAC ATGAACGCGT TGCCCTGGTG AAGTGGCCGC CAAACGAAGC GTTTCAGCCG 
CATCGTCACT TTGGTGGAGA AGAGATCTTT GTGCTGTCGG GCGAATTCCG TGATGAACAC 
GGCCGGTATC CCGCAGGAAG CTGGATTCGC AGCCCGCATA TGAGCCAACA TCATCCGTTT 
GTAGAACAGG AGACGGTCAT CTGGGTAAAA ACCGGCCACT TACCGGTAAA CCACTCCCCT 
GAAACGTAA
 
Protein sequence
MLNMDFSRRV VIRTHEQHWV PSPAAGVERK PLAREEAERG HATSVVRYKP GSSFSTHEHP 
LGEEILVLEG VFSDETGHYP AGTYIRNPPG SSHAPFSEEG CTLLVKLHQF DPRDTATVRI 
DTNSGHWLPG IGGLQVMPLH EFEHERVALV KWPPNEAFQP HRHFGGEEIF VLSGEFRDEH 
GRYPAGSWIR SPHMSQHHPF VEQETVIWVK TGHLPVNHSP ET