Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_1080 |
Symbol | |
ID | 4655961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 1228630 |
End bp | 1229535 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639811044 |
Product | Beta-lactamase |
Protein accession | YP_958359 |
Protein GI | 120554008 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0392714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTTC AAAAGCTTAT CGCAGCTATT TTACTTACCT TGTCCACCTC AGTTGCCTCT GCCGACCAAG ATAACTCCCT TATTAAAACT GTCAAGAAAG TCGCCGACGA CCTAGAGGCC CGTGTTGGCT TTGCTGCCTA TGATCTGGAA TCGGGTCAGC GGTGGGAATA TCACGCTGAT CAGCGTTTTG CGATGTCCAG CACATTTAAA ACCCTGGCTT GTGCCGCCCT GCTCCATCGG GTCGATACGG GACAGGCGAA CCTCGCGAGG AAGGTGAATG TTTCAGAATC CGATCTCGTG ACCTACTCGC CCATCACTGA GACGTACGCT GATGGTGAGG CGATGACCCT GTCAGACCTT TGCGAGGCTA CACTGACAAC AAGCGATAAT ACGGCTGCAA ATCTGGTTTT ACGAGAACTG GGCGGGCCAG AAGCAGTAAC CTCGTTTGCG AGGCATTTGG GAGACGATGT AACGCGTCTC GACCGCTGGG AAACGGAACT GAATGAAGCT TTACCAGGCG ATAACCGGGA TACCACAACG CCAAATGCGA TGGTCAGGAA TCTTCAGACC TTGCTGTTGG GTGACGCCTT ATCCGAACCG TCCAGAGAGC AACTGCGTGA TTGGCTCGAG GGCAACCAGG TTGCCGACGG GCTTTTTCGG GCTGCTGTAC CAGAGGGCTG GGTTGTCGCA GATCGAACCG GGGCTGGTGG TTTCGGATCG AGATCGATTA CGGCCGTCAT CTGGCCACCT GAGCGTCAAC CTATCGTTGT AGCGCTGTAT CTGACTCAGA CGGACGCTTC CTTCGCAGAG CGGAATGCGG CAATTGCTGA GATAGGTGAA GCAATCGTGT TGACGGTGCC GGTTGACCCC AGCCGCCACC AAGGGTTCAT CTATGGAGCT GACTAA
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Protein sequence | MIFQKLIAAI LLTLSTSVAS ADQDNSLIKT VKKVADDLEA RVGFAAYDLE SGQRWEYHAD QRFAMSSTFK TLACAALLHR VDTGQANLAR KVNVSESDLV TYSPITETYA DGEAMTLSDL CEATLTTSDN TAANLVLREL GGPEAVTSFA RHLGDDVTRL DRWETELNEA LPGDNRDTTT PNAMVRNLQT LLLGDALSEP SREQLRDWLE GNQVADGLFR AAVPEGWVVA DRTGAGGFGS RSITAVIWPP ERQPIVVALY LTQTDASFAE RNAAIAEIGE AIVLTVPVDP SRHQGFIYGA D
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