Gene Maqu_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_1080 
Symbol 
ID4655961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp1228630 
End bp1229535 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content54% 
IMG OID639811044 
ProductBeta-lactamase 
Protein accessionYP_958359 
Protein GI120554008 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0392714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTTC AAAAGCTTAT CGCAGCTATT TTACTTACCT TGTCCACCTC AGTTGCCTCT 
GCCGACCAAG ATAACTCCCT TATTAAAACT GTCAAGAAAG TCGCCGACGA CCTAGAGGCC
CGTGTTGGCT TTGCTGCCTA TGATCTGGAA TCGGGTCAGC GGTGGGAATA TCACGCTGAT
CAGCGTTTTG CGATGTCCAG CACATTTAAA ACCCTGGCTT GTGCCGCCCT GCTCCATCGG
GTCGATACGG GACAGGCGAA CCTCGCGAGG AAGGTGAATG TTTCAGAATC CGATCTCGTG
ACCTACTCGC CCATCACTGA GACGTACGCT GATGGTGAGG CGATGACCCT GTCAGACCTT
TGCGAGGCTA CACTGACAAC AAGCGATAAT ACGGCTGCAA ATCTGGTTTT ACGAGAACTG
GGCGGGCCAG AAGCAGTAAC CTCGTTTGCG AGGCATTTGG GAGACGATGT AACGCGTCTC
GACCGCTGGG AAACGGAACT GAATGAAGCT TTACCAGGCG ATAACCGGGA TACCACAACG
CCAAATGCGA TGGTCAGGAA TCTTCAGACC TTGCTGTTGG GTGACGCCTT ATCCGAACCG
TCCAGAGAGC AACTGCGTGA TTGGCTCGAG GGCAACCAGG TTGCCGACGG GCTTTTTCGG
GCTGCTGTAC CAGAGGGCTG GGTTGTCGCA GATCGAACCG GGGCTGGTGG TTTCGGATCG
AGATCGATTA CGGCCGTCAT CTGGCCACCT GAGCGTCAAC CTATCGTTGT AGCGCTGTAT
CTGACTCAGA CGGACGCTTC CTTCGCAGAG CGGAATGCGG CAATTGCTGA GATAGGTGAA
GCAATCGTGT TGACGGTGCC GGTTGACCCC AGCCGCCACC AAGGGTTCAT CTATGGAGCT
GACTAA
 
Protein sequence
MIFQKLIAAI LLTLSTSVAS ADQDNSLIKT VKKVADDLEA RVGFAAYDLE SGQRWEYHAD 
QRFAMSSTFK TLACAALLHR VDTGQANLAR KVNVSESDLV TYSPITETYA DGEAMTLSDL
CEATLTTSDN TAANLVLREL GGPEAVTSFA RHLGDDVTRL DRWETELNEA LPGDNRDTTT
PNAMVRNLQT LLLGDALSEP SREQLRDWLE GNQVADGLFR AAVPEGWVVA DRTGAGGFGS
RSITAVIWPP ERQPIVVALY LTQTDASFAE RNAAIAEIGE AIVLTVPVDP SRHQGFIYGA
D