| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0930 |
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| Symbol | |
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| ID | 4656569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 1060834 |
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| End bp | 1061832 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639810893 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_958213 |
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| Protein GI | 120553862 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTAG AACAGGAAGA TATCATCATT GATCGCGTAG CAGATCTGGA AGACGCCGAC
GATCAACTGT TAGCCGAAGA CAAGCCTGAA AAAGCTTCTG CTGAAGACGA AACTGCAGAA
GTCGAAGACG GATTTCCCGC ACAGGGAAAG TACTACTCCA ACCAGAAGCA GCTGGATGCC
ACTCAGCTGT ACCTCAACGA AATTGGTTTT TCTCCCCTGC TTACTCCGGA AGAAGAGGTG
TACTTCGCGC GGCTTGCCCG TAAAGGGGAA GAGAGCGGCC GTAAGCGCAT GATCGAGAGT
AATCTCCGGT TGGTGGTCAA GATTGCGCGC CGCTACGTCA ACCGTGGGCT GACACTGCTT
GATCTGATCG AGGAAGGCAA CCTGGGGCTG ATTCGGGCGG TTGAGAAGTT CGATCCCGAG
CGTGGATTCC GTTTCTCCAC CTACGCTACC TGGTGGATTC GCCAGACCAT CGAGCGAGCC
ATCATGAACC AGACCCGCAC CATCCGTCTG CCGATTCATG TGGTCAAGGA ATTGAACCTG
TACCTGCGGG CCGCCCGTGA GCTGACCCAG AAACTGGACC ATGAACCGAC CGCGGAAGAA
ATTGCCCGCA TGGTCGACAA GCCGGTTGAC GACGTAAAAC GCATGCTCGG CCTCAACGAG
CGCGTTGCCT CCATGGACAC TCCGATCGGG GCCGGGAGTG ACAAGTCCCT GATGGATACC
GTGGCCGATG AGGGCGCGTC GGATCCTGCG GATCTGCTGC AGGACAACAA CATGTGTTCA
TGCCTGGAGA AGTGGATTGA TCAGCTCAGC GACAAACAGC AGGAAGTGCT TTCCCGCCGT
TTCGGGCTGA GGGGCTATCC CATCAGTACC CTGGAAGAGG TTGGCCAGGA GATTGGCCTG
ACCCGGGAAA GGGTGCGGCA GATTCAGGTG GAAGCCTTGC GTCGCCTGCG GGAGATCCTT
GAGAAAGAGG GATTGTCCGG AAGTCTGCTG TTCAAATAG
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| Protein sequence | MSVEQEDIII DRVADLEDAD DQLLAEDKPE KASAEDETAE VEDGFPAQGK YYSNQKQLDA
TQLYLNEIGF SPLLTPEEEV YFARLARKGE ESGRKRMIES NLRLVVKIAR RYVNRGLTLL
DLIEEGNLGL IRAVEKFDPE RGFRFSTYAT WWIRQTIERA IMNQTRTIRL PIHVVKELNL
YLRAARELTQ KLDHEPTAEE IARMVDKPVD DVKRMLGLNE RVASMDTPIG AGSDKSLMDT
VADEGASDPA DLLQDNNMCS CLEKWIDQLS DKQQEVLSRR FGLRGYPIST LEEVGQEIGL
TRERVRQIQV EALRRLREIL EKEGLSGSLL FK
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