Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_0897 |
Symbol | |
ID | 4656328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 1023055 |
End bp | 1024695 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639810860 |
Product | response regulator receiver protein |
Protein accession | YP_958180 |
Protein GI | 120553829 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCCAT CCGACCGGAA AGACGCAGTA AATCCGTTTG GCAAGCTTAC TTTTCTTGTT GTCGACGATT TCGAGAACTT TCGGCTATCC ATGCGGCAGA TGCTCCGCAG TTGTGGTGCC GACAAGATTG AGCTGGTTGC TCACGCCACG CCCGCCATCC AGTACTGTAC CTACAATCAC GTCGATGTCG TGCTGTGCGA TTACAACCTG GGGGAAGGCA AAAACGGCCA GCACGTACTG GAAGAGCTGA GGCACAAGAA ACTCCTCAAA CGCTCATCGC TGTTCCTGAT GGTAACCGCG GAAACCTCCA AGGAAATGGT CATGGGGGCA CGGGAATATC AGCCTGACGG CTATCTGACA AAGCCCATTA ACCGTGCCAT GCTGGAGCAA CGTCTGGGCA GCCTGATCAA ACAGCGCAAT GCCCTGCTCC CCATCACCCG GGAGATCGAT CGGGAAAACT ACCCGGAAGC CATCAGTCTT TGCCTGCAAA CCCTGCCCAA ACAGCCGCGC TACAAAACCT GGCTGATGAA GACACTCGGA GAACTCTACT TCATGGTCGG CGACCTGGCC CACGCCCAGA AAGTCTACGA TGATGTTCTG AATCAGCGGG AGCTGTCCTG GGCCCGGCTA GGCCGGTGCA AGGTGTTGCT GGCCAACCGG AACTTTGATC AGGCCGTCGA CGGCCTCAAG GCTCTGATTG AAAAACACCC TGACTATATG GAAGCCTACG ACCTGCTGGC CGAAGGCCTT CAGAAACAGG GACGATCGGC CCAGGCCCAA CAGGTTCTTG AGAAAGCGGC TGAACATTCC CCCAACGCTC TGCTCCGCCA GAAGCATCTC GCTGAACTGG CCGGCGCAAA CCAGGATATT GACACCGCCT CCCAGGCGTG GCGACAGACG GTGTCTCTGG GCACCTATTC CATACACGAC AATGCAGAGC ATTACCTGTC GCTCGCCCAG AGCCTGTCCG ATCTGAGCGA GGGCGACCTG GACGAAGAAG GCGCGGCGCG CTCGTCAGAA GCCCTCTCTG TGCTTACGAA AATGGAGAAA CGCTTCGACA ACGATGAAAC CATCGGGCTC AAAAGCCGGA TCGTCCAGTG CCGTCTCCAT GCCGGACAAG GCCGCCACCG GGAGGCCGAA AAGATTCTTA CCGCGGTCAG CTCGGAGCTC GAGAGCCTGG AGGAACTCCC GGCCGATATG GGGCTGGATT TCGCAAAAAC CCTGTTCCGG ATGGGCCGGG AAGATCAGGC CAAAAGAATC CTCGGCGATC TGGCCTCACG ATTTGATAAC GACCCGGATA CCTTGCAGAA AATTGAAAAC CTCCTGGACG AGCCCGTTGG CTTCCGTCAG AAACTGGAAG CACGCAGCAT GAACCGGGAT GGCATCAAAG CGTTTGAGGC AGGCGACCTC GACGCTGCAG TGGAAGCCTT CAACAAAGCC CTGGCGATCG TTCCGGACCA TGCTGCCCTG AACCTGAACC TGGTTCAGGT GTTGATGAAG CAATACGACC AGAACCCGGA GCCTGCGTTA CTGGCTGCCT GCCAACAGCG CCTGGATCAT CTGAACAAGC TGCCGGAGCA GCATCGTCAA CACCGTCGAT ACCTGGCCCT CACCCGAAAA CTGAAAGGAC TGACCGCATG A
|
Protein sequence | MNPSDRKDAV NPFGKLTFLV VDDFENFRLS MRQMLRSCGA DKIELVAHAT PAIQYCTYNH VDVVLCDYNL GEGKNGQHVL EELRHKKLLK RSSLFLMVTA ETSKEMVMGA REYQPDGYLT KPINRAMLEQ RLGSLIKQRN ALLPITREID RENYPEAISL CLQTLPKQPR YKTWLMKTLG ELYFMVGDLA HAQKVYDDVL NQRELSWARL GRCKVLLANR NFDQAVDGLK ALIEKHPDYM EAYDLLAEGL QKQGRSAQAQ QVLEKAAEHS PNALLRQKHL AELAGANQDI DTASQAWRQT VSLGTYSIHD NAEHYLSLAQ SLSDLSEGDL DEEGAARSSE ALSVLTKMEK RFDNDETIGL KSRIVQCRLH AGQGRHREAE KILTAVSSEL ESLEELPADM GLDFAKTLFR MGREDQAKRI LGDLASRFDN DPDTLQKIEN LLDEPVGFRQ KLEARSMNRD GIKAFEAGDL DAAVEAFNKA LAIVPDHAAL NLNLVQVLMK QYDQNPEPAL LAACQQRLDH LNKLPEQHRQ HRRYLALTRK LKGLTA
|
| |