| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0352 |
|---|
| Symbol | |
|---|
| ID | 4654080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 407015 |
|---|
| End bp | 408301 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639810307 |
|---|
| Product | TRAP dicarboxylate transporter, DctM subunit |
|---|
| Protein accession | YP_957644 |
|---|
| Protein GI | 120553293 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
|---|
| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.632567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTA TTATGATGAT CGTCATGATC GGGCTGCTGC TTCTGGGCTT CCCGATGATG
ATTCCGCTAA CCACTGCTGC CGTCATCGGC TTCGTTATGA TGTTCGATGG CTTCGGGCAG
ATGGGCACAT TCATCCAGCA GATGATGGGT GGCATCCGGC CAGCGTCGTT GATTGCGGTA
CCCATGTTCA TTCTGGCGGC CGATATCATG ACCCGGGGCC AGTCTGCGGA CCGCCTGATC
AATATGGTCA TGGCCTTTAT CGGCCACATC AAAGGTGGCC TCGCCATCAG TACCGCCACC
TCGTGCACCC TGTTCGGGGC GGTGTCTGGC TCAACCCAGG CCACCGTGGT TGCCGTAGGC
TCACCGCTGC GCCCGAAAAT GCTCAAAGCT GGCTACTCCG ATCCGTTCAC GCTGGCTCTG
ATTATCAACG CCAGTGATAT CGCCTTCCTG ATCCCTCCCA GCATCGGCAT GATCATCTAC
GGGGTCATCT CGGAAACCTC CATTGCCGAG CTGTTCATTG CGGGTATCGG CCCGGGCATC
CTGATTTTGT TCATGTTCTC GATCTACTGC CTGATCTACG CCTACAAGAA CGATGTTCCG
ACGGAAGCCA AGGCCAGCTG GAAAGAACGG GCGATGTCAG TCAGGGATGC CTCCTGGCCC
CTGATGTTCC CGGTGATCAT TGTCGGCGGT ATCTACGGCG GCATTTTCAG CCCCACAGAA
GCAGCAGCAG TCTGCGTGCT CTACGCCTTC CTGCTGGAGT TTGTGGTCTT CCGGTCACTG
AAACTGAACG ACATTTACAA GATTGCCAAA TCCACCGGGC TGATCACGGC TGTGGTGTTC
ATTCTGGTGG CCGTGGGTAA TGGCTTCTCC TGGATCATTT CCTTTGCCCA GATTCCCCAG
GCCATCCTGG AAGCGGTGGG CGTCAACGAG GCCGGGCCTG TGGGCGTGCT GATTGCCATC
TGTGTGGCTT TCTTCATCGC CTGTATGTTC GTCGATCCCA TCGTGGTTAT CCTGGTGCTG
ACACCGATCT TTGCGCCGGC CATTCAGGCC ACCGGGCTGG ATCCGGTGCT TGTCGGTGTG
CTGATTACCC TGCAGGTGGC CATCGGTTCT GCCACGCCAC CCTTTGGCTG CGACATTTTC
ACCGCCATTG CCATCTTCAA ACGGCCCTAC ATGGAAGTTA TCCGGGGTAC GCCTCCGTTC
ATTTTCATGC TGGTGGCGGC TGCCGGCCTG ATCATCGCCT TCCCGGATAT TGCCCTGTTC
CTGCGTGACA TCGCGTTCAG GGACTAG
|
|---|
| Protein sequence | MATIMMIVMI GLLLLGFPMM IPLTTAAVIG FVMMFDGFGQ MGTFIQQMMG GIRPASLIAV
PMFILAADIM TRGQSADRLI NMVMAFIGHI KGGLAISTAT SCTLFGAVSG STQATVVAVG
SPLRPKMLKA GYSDPFTLAL IINASDIAFL IPPSIGMIIY GVISETSIAE LFIAGIGPGI
LILFMFSIYC LIYAYKNDVP TEAKASWKER AMSVRDASWP LMFPVIIVGG IYGGIFSPTE
AAAVCVLYAF LLEFVVFRSL KLNDIYKIAK STGLITAVVF ILVAVGNGFS WIISFAQIPQ
AILEAVGVNE AGPVGVLIAI CVAFFIACMF VDPIVVILVL TPIFAPAIQA TGLDPVLVGV
LITLQVAIGS ATPPFGCDIF TAIAIFKRPY MEVIRGTPPF IFMLVAAAGL IIAFPDIALF
LRDIAFRD
|
|---|
| |