| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0150 |
|---|
| Symbol | |
|---|
| ID | 4655148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 181899 |
|---|
| End bp | 182891 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639810107 |
|---|
| Product | RNA polymerase, sigma 32 subunit, RpoH |
|---|
| Protein accession | YP_957444 |
|---|
| Protein GI | 120553093 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.427759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAC AGAGCCGGCC GGGACCGCTT CCGACGCTGC CCAACGATGG TGAAAGGGAT
TCCCTGGTCG GGTTGTATTT CAGGGATGCG TCCCGGCATG ACCTCCTCAG CGAAACCGAT
GAACGGCGTC TGGCCAGAAA GCTGATCCGG TCGCTACGGG TGATTCACAC CGAGCTGGCA
TTACCCGAGG ACACCCCACA AACCTTGCGG GATGTGGTGG GTAGCCTCGG GGATGCCTGT
GCCTTTTCGG CCCGCTGTCG CCGGGCTTAC CACCTTGCCC TGGCCTGCCG TCACCGCCTG
ATTCAGAGCA ATCTGAGGCT GGCGGTACAT ATCGCCCGCC GCTACGGCCA TCACGGCATT
GCCATGTCGG ACCTGATCCA GGACGCCAAC GTGGGGCTGA TCAAGGCCGT AGAGCGCTAC
GACCCCGGCA AGGGTTTCCG GTTTTCCACC TACGCTTACT GGTGGATCAG CGAGGAAGTG
CGCCGCTGCC TGCAGCGGGG TGTGCGTGTG GTGCATACGC CGGAAAACGT GGTTGAGGAG
ATCCGCCAGT TGCAGAAGGT ATCCATGCGT TTGCATCAAT CCCTCGGCCG GGAGCCCACC
CAGTCCGAGC TGGCCCGGGA AATGGAGGCC ACACCCTCCA GGATTGGCGA ACTGAGAGCC
CTGGCGGCCC GGGAAGTCTC AACGGATGTA CCACTGGTCG AAGATGGATC GGTGACCCTG
GCTGACAGTC TTGATGCGGG TGCCGATACC CGCCCGGACC AGCCGTTTCG GGCGCGGGAC
CGGATGATTC GGCTGGAGCG CATGATGGGG GCGTTGTCGG ACCGGGAGCG GGATATCCTG
ACCCGGCGTT ACGGGCTTGG CTTGATTGAA CCGGAGACCC TGCAAACCAT TTCGGAACAG
CTGGGTCTCA GCCGGGAGCG TGTGCGACAG ATCGAGAAAG GCGCTTTGAG AAAGCTGCAG
ACCCTGTTTG GAACCGATCC TGACGGTGCC TGA
|
|---|
| Protein sequence | MQIQSRPGPL PTLPNDGERD SLVGLYFRDA SRHDLLSETD ERRLARKLIR SLRVIHTELA
LPEDTPQTLR DVVGSLGDAC AFSARCRRAY HLALACRHRL IQSNLRLAVH IARRYGHHGI
AMSDLIQDAN VGLIKAVERY DPGKGFRFST YAYWWISEEV RRCLQRGVRV VHTPENVVEE
IRQLQKVSMR LHQSLGREPT QSELAREMEA TPSRIGELRA LAAREVSTDV PLVEDGSVTL
ADSLDAGADT RPDQPFRARD RMIRLERMMG ALSDRERDIL TRRYGLGLIE PETLQTISEQ
LGLSRERVRQ IEKGALRKLQ TLFGTDPDGA
|
|---|
| |