Gene Maeo_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_1233 
Symbol 
ID5326615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand
Start bp1300270 
End bp1300869 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content32% 
IMG OID640788643 
Producthypothetical protein 
Protein accessionYP_001325421 
Protein GI150401655 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3505] Type IV secretory pathway, VirD4 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.616715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAG CAAATATAAA ACACATCATA ATTAATGGAG CATCTGGAAC TGGAAAATCA 
GAATATTTTA AAAGGAATAT TTTAAAACCT GCAATAAAGA AAAAAGTAAA GGTAGTAGTA
ATTGACCCAG AAGACGAATA CGATGGCATA TACAAAACTT CCACCAAAAG CATTTTGAAT
GATTTAAGAA CTAAACCTAT TATAAGATAT GTTCCTAATT TAAGACAAGA TAATTACCTG
GAACAGTTGG ACAGACTGTA TCAAAAAATA TTTGATAATG TAAAGGGTTG TATCATTGCA
ATAGATGAGG CAAGATTTTG CGGAGGAGCT CAGTATAAAT TATCAAGTGG TTTGTTGGAA
CTTATAACAA GGGGTAGGAA AAGAGGTTTA AAACTGGTTG TAATCACTCA AAGAATAGCA
CTTCTTGATA AAACAATAAC TGGGAACTGT CAGATAAAAG TATTGTTCAA GTGTGCGGAG
GATGTGGATT GGGACAGGTA TAGAAAAGTA AATAAAGAAT TAACTGATAA GTTAAAACAT
TCAAAAAATG ACCATGCCTA CATATATATA ACTGGGTTAA ATGCTAAATT GGTGGAATAA
 
Protein sequence
MAGANIKHII INGASGTGKS EYFKRNILKP AIKKKVKVVV IDPEDEYDGI YKTSTKSILN 
DLRTKPIIRY VPNLRQDNYL EQLDRLYQKI FDNVKGCIIA IDEARFCGGA QYKLSSGLLE
LITRGRKRGL KLVVITQRIA LLDKTITGNC QIKVLFKCAE DVDWDRYRKV NKELTDKLKH
SKNDHAYIYI TGLNAKLVE