| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1186 |
|---|
| Symbol | |
|---|
| ID | 5327215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 1252912 |
|---|
| End bp | 1253874 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640788591 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_001325375 |
|---|
| Protein GI | 150401609 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAT TTGACAAAAC CATATTATTG AAAATTGAGG AAGAATTAAA TAGACAAGTA
AATAAAGAAG GCAAGCTATA TGAAGCATCG AAACATCTTT TATTTGCAGG GGGTAAAAGA
ATTAGGCCTT ATCTGTCTGT TTTAACCTAT CTATTAAAGA AAGATGATAT TGATGAGGTT
CTAACCCCTG CTGTCTCTGT GGAATTAATC CATGGTTATT CCCTTATCCA TGACGATATT
ATGGATAATG ACAGTGAAAG GAGAGGAAAA CCTACTGTTC ATATAGTATA TGGGGAACCT
ATTGCAATTC TTGCAGGGGA TTTACTTAAT ACTTTGGCAT TTAATGCAAT TTCTCAAATG
GAGAATTTAG AAAAGGCACA CGAAATATTA AAAATAGTAA GTAAAGCATC TGTGAAGGTT
TGCGAAGGGC AGGCAACAGA TATGGAATTC GAAGAAAGAG AAGTAATTCC TACAATTGAT
GAATATTTTG ACATGATTTC AAAGAAGACA GGAGCATTAA TTGTAGCACC TATTGAAATA
GGGGCAGTAA TGGCAGATTT TACCGAAGAA GAAAGAAAGG CAATATGCGA ATATGCTAAA
AGAATAGGTA TGACATTCCA AATACAGGAT GATGTTCTTG ATTTAATCGG GGATAAAAAT
ACCATTGGAA AACCAGTTGG AAGCGATATA GTGGAAGGTA AAAAAACTAT TATGGTATTA
CATGCACTTC AAACACTTCC AGAGCCTGAA AAACAAAGGT TTTTAAAAAT ATTAGGAAAT
AGCAATGCAA CAGATGAAGA AATTAAAGAA GCTATTGAAA TGTTGGGCCC TTCTATTAAT
TATGCAAAAG ATATTATGAA AACTGCCACA ATAGAAGCAA AAGATTATTT AAAAATATTT
GATGAAGAAA AAAGGAAAAG ATTAGAAAAT ATCGCTGAGT TTATAATTGA ACGGGTTTTC
TAA
|
|---|
| Protein sequence | MELFDKTILL KIEEELNRQV NKEGKLYEAS KHLLFAGGKR IRPYLSVLTY LLKKDDIDEV
LTPAVSVELI HGYSLIHDDI MDNDSERRGK PTVHIVYGEP IAILAGDLLN TLAFNAISQM
ENLEKAHEIL KIVSKASVKV CEGQATDMEF EEREVIPTID EYFDMISKKT GALIVAPIEI
GAVMADFTEE ERKAICEYAK RIGMTFQIQD DVLDLIGDKN TIGKPVGSDI VEGKKTIMVL
HALQTLPEPE KQRFLKILGN SNATDEEIKE AIEMLGPSIN YAKDIMKTAT IEAKDYLKIF
DEEKRKRLEN IAEFIIERVF
|
|---|
| |