Gene Maeo_0280 details

Gene Information

• Locus tag: Maeo_0280
• ID: 5326344
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus aeolicus Nankai-3
• Kingdom: Archaea
• Replicon accession: NC_009635
• Strand: +
• Start bp: 305922
• End bp: 306509
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640787674
• Product: DNA-directed RNA polymerase subunit E'
• Protein accession: YP_001324481
• Protein GI: 150400715
• COG category: [K] Transcription
• COG ID: [COG1095] DNA-directed RNA polymerase, subunit E'
• TIGRFAM ID: [TIGR00448] DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.45768
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTATAAAT TAATAACCAT ATCTGACACC ATTAGAGTTC CACCCAAAAT GTTCGGAGCT 
CCCTTAAAAG ATAGCATACA TAAAATATTA ATGGAGAAAT ACGAAGGATT AATGGATAAA 
GACTTTGGTT TTATAATGTC CATAGGCGAT ATCGGAGAAA TTGGGGGGGG CAAGGTAGTT 
TATGGAGACG GAGCGGCATA CCACCCTGCA ATCTTTGATT TATTATGTTA TGAACCAGAA 
CTATATGAAA TTATAGAAGG AGAAATTGTA GATGTTGTAG AATTCGGTCT TTTCGTAAGA 
TTGGGCCCGT TAGATGGACT TATACACATA TCCCAAATTA TGGATGATTT CGTATCTTAT 
GACCCGCAAA GGGGTGCTAT CATTGGAAAA GAAAGCGGAA AAGTTATTGA AAAAGGCGAT 
AAAGTTAGGG CAAGAATCGT GGCAATTAGT TTAAGAGAAG CTAAAAGAAG AGGAAGTAAA 
ATAGCTTTAA CGATGAGACA GCAAGGACTA GGAAAATTAG AATGGATTGA AGAAGAGAAA 
AATAAAAGAG CTAATATCAA CAATACAAAG GCTATTGCGG AAGAATAA 

 

Protein sequence

MYKLITISDT IRVPPKMFGA PLKDSIHKIL MEKYEGLMDK DFGFIMSIGD IGEIGGGKVV 
YGDGAAYHPA IFDLLCYEPE LYEIIEGEIV DVVEFGLFVR LGPLDGLIHI SQIMDDFVSY 
DPQRGAIIGK ESGKVIEKGD KVRARIVAIS LREAKRRGSK IALTMRQQGL GKLEWIEEEK 
NKRANINNTK AIAEE