| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0167 |
|---|
| Symbol | |
|---|
| ID | 5326358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 185687 |
|---|
| End bp | 186568 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640787562 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_001324371 |
|---|
| Protein GI | 150400605 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00051892 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATAG TATCGGGTTC AAATTCTCAA AATTTGGCTC ACAAAGTTTC AAAATTAACT
AATTCAAAAC TAATTAGAAC AGAATTTAAA AAATTCCCTG ATGGGGAGCT ATATGTAAAA
ATAAATGGTA GCGTAGAAGG AGAGGATGTT TTCTTAATCA ATACCCAAAA TAACCAAAAT
GAATCAATAA TAGAAACCAT ATTATTATGC GACGCATTAA ATGATGAAGG GGCAAGAAGT
ATAAACTTAG TAATTCCTTA TATGGCTTAT GCTAGACAAG ATAAAAAGTT TAAAGATGGT
GAATCAATTA GTATTAGAGC TTTGGCAAAA GTTTATTCTA CCATATGCGA TAGCATATTT
ATAATAAATC CACATGAAAA AGATATATGT TCTTTTTTTG ATGTTCCGTT GGTATATGGT
GATGCAGTTC CCGAAATTGC AAAATACATA GCCAATAAAT ACGATGGCTC AAATTTTGTA
GTGCTTTCTC CAGATAAGGG AGCAATACGA ATGGCAAAAG TTGCATCCAA TATATTAAAT
TGCCCCTACG ATTATCTTGA AAAAACCAGA ATATCTCCAA CAGAAATAAG CATTGCACCA
AAAAATTTAG ATGTAAAAGA TAAGGATGTT CTTATCATTG ATGATATAAT CTCAACAGGT
GGAACTGTGG CTACAACTAT AAAGATGTTA AAGGAACAAG GTGCAAAAAC AGTTATAGCA
TCATGTATTC ATCCTGTTCT TATTGGTGAT GCATTGAATA AATTATTTGA TGGAGGGGCT
GATGAAGTCA TTGGAACAGA TGCATATTTG TCCGAAGTTA GTATAATTAG TGTGGATAAT
ATTGTTGCAG ATTTAATTAA TAAACATATT AATAATATAT AA
|
|---|
| Protein sequence | MLIVSGSNSQ NLAHKVSKLT NSKLIRTEFK KFPDGELYVK INGSVEGEDV FLINTQNNQN
ESIIETILLC DALNDEGARS INLVIPYMAY ARQDKKFKDG ESISIRALAK VYSTICDSIF
IINPHEKDIC SFFDVPLVYG DAVPEIAKYI ANKYDGSNFV VLSPDKGAIR MAKVASNILN
CPYDYLEKTR ISPTEISIAP KNLDVKDKDV LIIDDIISTG GTVATTIKML KEQGAKTVIA
SCIHPVLIGD ALNKLFDGGA DEVIGTDAYL SEVSIISVDN IVADLINKHI NNI
|
|---|
| |