Gene MCAP_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCAP_0813 
Symbolhup 
ID3828969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycoplasma capricolum subsp. capricolum ATCC 27343 
KingdomBacteria 
Replicon accessionNC_007633 
Strand- 
Start bp938918 
End bp939544 
Gene Length627 bp 
Protein Length208 aa 
Translation table4 
GC content31% 
IMG OID637823962 
ProductDNA-binding protein HU 
Protein accessionYP_424760 
Protein GI83319548 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.911341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAT CAGAACCAAT AGCTGAACCA GAACCAATAG CTGAACCAGA ACCAATGTCT 
GAACCAGAAT CAATGATTGA ACCAAAACCA ATACCTGAAT ATAAATCAGT AGTTGAAGAA 
AAGTCAATGG TTGATCCAGA ACCAATACCT GAATCAGAGC CAATGGTTGA TCCAAAATCA 
ATGATTGAAC CAAAACCAAT ACCTGAGCCA GAATCAATGC CTGAACCAAA ACCAGTAATT 
GAAACTAAAT CAGTTATGGT TCCTACTCCT GTTGAAATTA AAAAAACAAC AGAAAAGTCA 
AAACCTACTA AAAAACGCAA AAAGAAAAAA GTTTATCCAC AAGTTACAAA AGGTATGTTA 
TTAGAAGAAC TTTATGAAGA CCCTGAGTTT GTAGAAATGA CTAAAGTTTC AATTAAAACA 
ATTTTTGATA AAGCCTTTAT TGTAGCAAGC AAAAACTTAG CTGCAGGAGA TCATGTTGTT 
CTTGCTAAAT TTGGTAAATT TGAAACAATA GAAAAAGAAG CTCAAATGAA AATGAATCCT 
TCAACTCAAG AAGAAATTGA AGTTCCTGCA CATAAAGTTG TTAAATTTAA ATTATCTAAA 
TCTATTAAAG AAAAAATGAA TAAATAA
 
Protein sequence
MIESEPIAEP EPIAEPEPMS EPESMIEPKP IPEYKSVVEE KSMVDPEPIP ESEPMVDPKS 
MIEPKPIPEP ESMPEPKPVI ETKSVMVPTP VEIKKTTEKS KPTKKRKKKK VYPQVTKGML 
LEELYEDPEF VEMTKVSIKT IFDKAFIVAS KNLAAGDHVV LAKFGKFETI EKEAQMKMNP 
STQEEIEVPA HKVVKFKLSK SIKEKMNK