| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0200 |
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| Symbol | |
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| ID | 3828421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007633 |
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| Strand | - |
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| Start bp | 242913 |
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| End bp | 246038 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 4 |
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| GC content | 22% |
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| IMG OID | 637823359 |
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| Product | spermidine/putrescine ABC transporter, permease protein and spermidine/putrescine-binding protein |
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| Protein accession | YP_424187 |
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| Protein GI | 83319667 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein
[COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.585418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TCTTAAAAAG AAGTTATTTT GCTTTTGTTT TGCTATTTAT TTATGCACCC
ATTTTAGCAA TGGTGATTTT TTCATTTAAT GATGGAGATA CTACTATTAA ATGAACTCAT
GCTAGTTTTT CTTGATATGA ATCATTTTTT AAAAATTCAC CTTTTATAAA ATCAATTATT
ACTTCTTTAT TTGTTGCTGT AATTTCAACT GTAGTTTCAC TAGTAATTGG AACTTTAGCA
GCAATTGGAT TAAGTAGAGT TAATAGAGTA ACTAGAAATA AATGAGTTTC AATTGCAAAT
ATTCCTTTAA TTAATGCTGA TGTAATCACA GCTGTATCAC TAATGATCGT TTTTTTAATT
ATGGGATTAA AATTTGGAAT ATTAACTTTA ATTATGGCTC ATATTTCATT TAATGTTCCT
TATGTTTTAG TTACAATTAT GCCTAGATTA AAAAAAATTG ACCCAAGTTT AATTGATGCT
AGTTATGATT TAGGTGCTAA AAATCACCAA GTAATGTTTA AAGTAATATT ACCTATTTTA
AAACCAGCAA TTATTACTGC AGCTGCTATT GCTTTTGCAA TGAGTTTTGA TGATTTTATT
ATTTCTTATT TTACTGGTGG TATGCAAACT AATGTTTCAA CATTTATTTA TACTGCTAAA
AAAACTAGAC CATTTATTTT TGTTTTTGGT ACTTGTTTAG TTTTAGTGAT TGCTTTATCT
ATTATTACTT GAAATACAAT TAATTTAATT AGACAGTCTC GTTTAGAAAC TAAACAAAAA
TTAATTAATA ATAATTACAA ACTAAAAACA ATTTCTAAAT TAAATAAACA ATTAAACGAA
CTAAGTGAAG TTTTAAAAAC TAAAACTATT ATTAAAAAAT CTCATAATCT TTCTTTATGG
TTTAAATACT TTATTTTAAA AACTAAGATT TATTTTTATA AATTAAAAAG TTTAGACAAA
AAAATCTCAA AATTACAATG AAAGCAATAT AAATTAAAAT CAAAAATTCA AAAAGAAGAA
AGATATTATT CAAGATTAAA AAAATCAGAA AAAAAATTAA AGCAATTAAT TAAACTATTT
AGTAGTGAAA AAGATGTTAA AAAAGCTGCT AAATTAAGTT TACAAATTGA GACTTTACAA
GAAAAAGTAG AATTTTTAAA AGACCAAATT GAAGTAATTA AAGAACGTGA GCAAACTGCT
AATTTAAAAG TTAAAAAATT ACAAAATAAG ATTAAACTAT TAAAACAAGA TTTATCTCAA
GAACAAAAAC CTTCTAAAAA ATTAATTAAT TGATATAATA AAAAAATTAA ATACTTTGAA
GAATGAATTA TTGAACTTGA AGAAGGTAAA GATTATTACA AATTAAAATT GGTTGTTGAA
AAATTAAAAA ACTTACAAAA TATTAAAAAG AATAAAATTA ATGAATTAAC TGATCAATTA
AATATATTAA TTAGTAAAAT TTATATTCCT ATTTTAGTTA CTAAAGATAT TGATTTAAAA
ATTCAAAACA CAACTGATTT AGAAGTTTTA AATAATTTAA ATCAAAAAAG ACAAATTATT
ATTGATAAAT TTACTAAAGT CTATAGTCAA AAAATTGATA AAACTACAAT TTTAATTCAA
AAGATTGATA AAAAAACTGA TAAGCTAAAA AGTAAATTAT TACCAAGTCA AAATGAGAAT
ATATCTCACT TTAGATCATT TTTTTCAAAA TCTTGAAAAG CTATTTTGAT TTCACTTATT
GGAATTGGAG CTTTTAGTGG ATTAACTGCT GCTTATGTTT TAAATAATAT TTATGATTTG
GTTGTTGCTA ACTGGGGAGA ATATATTGAC CCTTCACTAA TTGGTGAATT CGAACAACAA
GCAAGTAAGA AACATAATAA AAGAATTAGA ATTAATTATC AAATTTATAA CTCAAATGAA
ATTTTATATA ATAAACTTCA TACAGTTGAT TATGATATTA TGATCCCAAG TGATTATATG
GTTCAAAGAC TAGCTTCAGA AAATTACTTA CAAAAAATTG ATTACAGCAA GTTAAATATT
TGAGGAGAAT TTAATAGTCA GAATTTCAAT AAAAATCACG AAAATAATAA TGATTATAAA
AAACTAAAAG TAAATAAAAG CTTATTAGAA TTAATGACTA AATCTCCTAT TAATAGAGAA
GATGAAACTA AAGAAATAAT AACAAAAAAT CCTAAAGGAA CATATTTAAA TACTAATTCT
ATTTTAGATT ATTCAATTCC ATATCTATGA GGTGATTTAG TAATTGTTGT TAACCCAACT
GAATCAAATA TAAAATTTCT AGAAAATTCT GGAATTAAAT TTAAGAACAA TAATGGTACT
AATGATAATA AAAACAAAAT AGAAATTGAT AATTCAACAT TGTCTTGAGA TATTTTATGA
AAAGCTGCAA AAGCTGGTAA AAAAGTAGCT TTAAATAATG ATCCAAAAAA TGTATTTATG
TTAGGATCAC AAAAACTTTA TCAAAAAGTT AACCTAACAA AAAAATCTGA AATTGATGCT
GTTGGTAAAG AATTATCTGA TTTATTATCA AATACTGGTG TTTCATTACA TAGTGATGAT
CTAATAAGTT TAGTAGTTAG AGAAAAATTT GATTTTGCTG TTATGTATAA TGGTGATGCT
GCTTATGCCA ATTATGTTCA TAATGAAGGT GATGAAGATT ATGAAAAGGC CGAAAAATCT
ATAAATTATA TTTATGGAAG ACCAAATAAA AAACATGATT CAAACAATAG ATATGAATCA
ACTAATGTAT TTTCAGATAA TATAGTTATT TATAAAGATG CTCAAAATTT AGATTTGGCA
TATGAATTTA TTAATTTCTT ATATGATAAT TCAACAAAAA TAACTGAATA TGTTGGAGTA
ACTTCACCAT TAGATTCAAC AATTGAAGAA ATGACATCTG CTCCTTCTAA TAAAAATGAA
GAACAAGAAG ATGGTGAAGA AAATGAAGGT GGAACTTATC ACAACTTCAA AAATCTTTAC
GATCCAATAA CTCATCAAAA TGCAAATAAT TATCAAACTA ATAATGAACA ATTATCATTT
ACATATAATG GTAAGATTGA TGAATACCTA GTTAATAGTT TTAATAATTT ACTTGCTAAT
AAATAG
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| Protein sequence | MKKLLKRSYF AFVLLFIYAP ILAMVIFSFN DGDTTIKWTH ASFSWYESFF KNSPFIKSII
TSLFVAVIST VVSLVIGTLA AIGLSRVNRV TRNKWVSIAN IPLINADVIT AVSLMIVFLI
MGLKFGILTL IMAHISFNVP YVLVTIMPRL KKIDPSLIDA SYDLGAKNHQ VMFKVILPIL
KPAIITAAAI AFAMSFDDFI ISYFTGGMQT NVSTFIYTAK KTRPFIFVFG TCLVLVIALS
IITWNTINLI RQSRLETKQK LINNNYKLKT ISKLNKQLNE LSEVLKTKTI IKKSHNLSLW
FKYFILKTKI YFYKLKSLDK KISKLQWKQY KLKSKIQKEE RYYSRLKKSE KKLKQLIKLF
SSEKDVKKAA KLSLQIETLQ EKVEFLKDQI EVIKEREQTA NLKVKKLQNK IKLLKQDLSQ
EQKPSKKLIN WYNKKIKYFE EWIIELEEGK DYYKLKLVVE KLKNLQNIKK NKINELTDQL
NILISKIYIP ILVTKDIDLK IQNTTDLEVL NNLNQKRQII IDKFTKVYSQ KIDKTTILIQ
KIDKKTDKLK SKLLPSQNEN ISHFRSFFSK SWKAILISLI GIGAFSGLTA AYVLNNIYDL
VVANWGEYID PSLIGEFEQQ ASKKHNKRIR INYQIYNSNE ILYNKLHTVD YDIMIPSDYM
VQRLASENYL QKIDYSKLNI WGEFNSQNFN KNHENNNDYK KLKVNKSLLE LMTKSPINRE
DETKEIITKN PKGTYLNTNS ILDYSIPYLW GDLVIVVNPT ESNIKFLENS GIKFKNNNGT
NDNKNKIEID NSTLSWDILW KAAKAGKKVA LNNDPKNVFM LGSQKLYQKV NLTKKSEIDA
VGKELSDLLS NTGVSLHSDD LISLVVREKF DFAVMYNGDA AYANYVHNEG DEDYEKAEKS
INYIYGRPNK KHDSNNRYES TNVFSDNIVI YKDAQNLDLA YEFINFLYDN STKITEYVGV
TSPLDSTIEE MTSAPSNKNE EQEDGEENEG GTYHNFKNLY DPITHQNANN YQTNNEQLSF
TYNGKIDEYL VNSFNNLLAN K
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