| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0118 |
|---|
| Symbol | |
|---|
| ID | 3828784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | + |
|---|
| Start bp | 142566 |
|---|
| End bp | 143576 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 25% |
|---|
| IMG OID | 637823282 |
|---|
| Product | oligopeptide ABC transporter, permease protein |
|---|
| Protein accession | YP_424110 |
|---|
| Protein GI | 83319997 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAT TATCTGAATT ATTCAAAGCT TGACATAATC GTAAAAAAAG AGCTGAATTA
AGTCCTACTA ATATTGATGG TTTTAATTTA GCTCCAAATA AACTTTTACG TCCTTTAGCT
TTTCAACAAT GACAAATAGT TGGTAATTTA TTAGAATTTA GCGAAACAAA TAAAATGCAT
AATCAAAAGA ATGCTTTTGT AGAATTCTTT TATCGTTTTT CAAGATCATT TGCTGGAGTT
TTTGGTTTTG TTATTCTATC GAGTTTAATC ATTTTATCTT TAATTATTCC TTTAACTACA
AAAGATCCAT TAATAATTGA TGTAGAAAAT AGAAATGAAA CATTTTTTAC TAATGGTCAT
ATTTTAGGAA CTGATGCATT AGGTAGAGAT TTGTGAGCTA GATTATGACA TGGATTAAGA
TATTCATTAA CTTTATCTGT TGTAGCTACT TTTATTCAAG TAATTATTGG GTTATTTATT
GGAATTATGA TGGGTCATTT TCGTATATTT GATAAATTAA TGACTTTTAT TATTAAAATT
ATTTCAAATG TACCTTCTAT TATTATTTTG ATTACTATTA CTATTATTAT TAAACCTACA
TTTTGAGTTA TGGTATTTGC ATTATCTTTT ACTTCTTGAA CAGGAATTGC AAATCAAATG
CGTTCACAAG TTTTAAGAGC AAAATCATTT GAATGAGTAA GTGCTTCAAA AGTTTTAGGA
ACTCCAACTT ATAAAGTTTT ATTAAACTAT TTACCAGTTT TAATACCTTT ATTAATTACT
GAAATTGTGT TTCATATTCC AGGAATTATA CTTTCTGAAA CTTCTTTAGC ATTTATTGGA
TTATCAATAC CAAATGTTGC AACTTTAGGT AATTTAATTA GTGATGGATC TAAAAACTTT
ACTGTGTTTC CTAGATATGT TTTAATTCCT TCATTTATGT TAATATTAGT AACTACTTCT
ATTCAATTAA TGGCTAATTC AGTTCAAGAT ACATTATTAA GACAAAGATA G
|
|---|
| Protein sequence | MSKLSELFKA WHNRKKRAEL SPTNIDGFNL APNKLLRPLA FQQWQIVGNL LEFSETNKMH
NQKNAFVEFF YRFSRSFAGV FGFVILSSLI ILSLIIPLTT KDPLIIDVEN RNETFFTNGH
ILGTDALGRD LWARLWHGLR YSLTLSVVAT FIQVIIGLFI GIMMGHFRIF DKLMTFIIKI
ISNVPSIIIL ITITIIIKPT FWVMVFALSF TSWTGIANQM RSQVLRAKSF EWVSASKVLG
TPTYKVLLNY LPVLIPLLIT EIVFHIPGII LSETSLAFIG LSIPNVATLG NLISDGSKNF
TVFPRYVLIP SFMLILVTTS IQLMANSVQD TLLRQR
|
|---|
| |