Gene MCAP_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCAP_0111 
Symbol 
ID3828348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycoplasma capricolum subsp. capricolum ATCC 27343 
KingdomBacteria 
Replicon accessionNC_007633 
Strand
Start bp130252 
End bp130986 
Gene Length735 bp 
Protein Length244 aa 
Translation table
GC content22% 
IMG OID637823275 
ProductRNA methyltransferase 
Protein accessionYP_424103 
Protein GI83319473 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.72575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCATA ACTTAATCTA TGGTAAACAT GTAATTTATG AATTATTAAA AAAGCATAAA 
AACATGGTTA AAGAAATTTG AGTTAAAAAT TTAAAACTTT TAGATGAATT TGATTTGAAA
AATACAAAAA TTAAAATAAA TGTTGTATCA GAAAATAAAT TAGATCAGTT ATTAAAAACA
AATGAATTAC ATCAAGGAAT TATTGCACAA ATTAAAGATT TTAACTATAC ACCATTTGAT
GAATTGCTTA ATGATTTAAA TACAAAAGAA AAATCACTAG TTTTAGTATT AGATCAAATT
CATGATCCTT ATAATTTTGG AGCAATTATT AGAAGTTGTA GTCTATTAAA TGTTGATGGA
ATTATTATTT TAGATAAAAA ACAAGTACAA GTTAACTCAA CAGTTCTTAA AACTAGTAGT
GGTTCAGCTT TTGATATTAA AATAAGTAAA ACTAATAATT TAAACAATGC TATTAAAATT
TTAAAAAATA ATGGCTTTTG AATTTATGCA ACTAATTTAA ATCAAAATTC AACTGATATG
ACAAAAACTC AATTTGCTAA TAAAAGTGTT GTAATTATTG GAAATGAGCA AAAAGGTGTT
AGTGAGTTAT TAACAAAAAA TAGTGATTTT AATATTTATG TTCCATCTAA TAAAAACATT
GACTCATTTA ACGCAAGTGT TGCTTGTTCA ATTATTTGTT TTTGAATAGC AAATTATTTG
AACAAATTGT CATAG
 
Protein sequence
MNHNLIYGKH VIYELLKKHK NMVKEIWVKN LKLLDEFDLK NTKIKINVVS ENKLDQLLKT 
NELHQGIIAQ IKDFNYTPFD ELLNDLNTKE KSLVLVLDQI HDPYNFGAII RSCSLLNVDG
IIILDKKQVQ VNSTVLKTSS GSAFDIKISK TNNLNNAIKI LKNNGFWIYA TNLNQNSTDM
TKTQFANKSV VIIGNEQKGV SELLTKNSDF NIYVPSNKNI DSFNASVACS IICFWIANYL
NKLS