26 homologs were found in PanDaTox collection
for query gene MCA3018 on replicon NC_002977
Organism: Methylococcus capsulatus str. Bath



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002977  MCA3018  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  100 
 
 
301 aa  598  1e-170  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6482  methylene-tetrahydromethanopterin dehydrogenase  49.67 
 
 
308 aa  289  4e-77  Burkholderia phymatum STM815  Bacteria  normal  normal  0.428861 
 
 
-
 
NC_007952  Bxe_B2431  methylene-tetrahydromethanopterin dehydrogenase(NAD+/NADP+) (mtdB)  49.83 
 
 
313 aa  284  2.0000000000000002e-75  Burkholderia xenovorans LB400  Bacteria  normal  0.145051  normal 
 
 
-
 
NC_008825  Mpe_A2607  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  51.97 
 
 
300 aa  278  8e-74  Methylibium petroleiphilum PM1  Bacteria  normal  0.0254365  normal 
 
 
-
 
NC_011666  Msil_2385  Methylenetetrahydrofolate dehydrogenase (NADP(+))  48.32 
 
 
295 aa  277  2e-73  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_1660  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  51.66 
 
 
299 aa  276  3e-73  Methylobacillus flagellatus KT  Bacteria  normal  0.028251  normal  0.670151 
 
 
-
 
NC_012791  Vapar_3084  Methylenetetrahydrofolate dehydrogenase (NADP(+))  52.01 
 
 
305 aa  275  5e-73  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5948  methylenetetrahydrofolate dehydrogenase (NADP(+))  51.05 
 
 
291 aa  271  9e-72  Burkholderia phymatum STM815  Bacteria  normal  0.620431  hitchhiker  0.00520062 
 
 
-
 
NC_002977  MCA3019  methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative  51.7 
 
 
293 aa  257  2e-67  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3152  methylenetetrahydrofolate dehydrogenase (NADP(+))  47.16 
 
 
303 aa  241  1e-62  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009720  Xaut_1787  methylene-tetrahydromethanopterin dehydrogenase  47.83 
 
 
297 aa  233  3e-60  Xanthobacter autotrophicus Py2  Bacteria  normal  0.322535  normal  0.634853 
 
 
-
 
NC_010505  Mrad2831_0528  methylene-tetrahydromethanopterin dehydrogenase  45.79 
 
 
297 aa  224  1e-57  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.82128 
 
 
-
 
NC_010725  Mpop_1780  Methylene-tetrahydromethanopterin dehydrogenase  45.97 
 
 
297 aa  223  4e-57  Methylobacterium populi BJ001  Bacteria  normal  0.0681451  normal 
 
 
-
 
NC_011757  Mchl_2164  Methylene-tetrahydromethanopterin dehydrogenase  45.36 
 
 
297 aa  221  9.999999999999999e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0602967  normal  0.200287 
 
 
-
 
NC_010172  Mext_1829  methylene-tetrahydromethanopterin dehydrogenase  45.36 
 
 
297 aa  221  9.999999999999999e-57  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5778  methylene-tetrahydromethanopterin dehydrogenase  46.64 
 
 
297 aa  213  2.9999999999999995e-54  Methylobacterium sp. 4-46  Bacteria  normal  0.618077  normal 
 
 
-
 
NC_011894  Mnod_6002  Methylene-tetrahydromethanopterin dehydrogenase  45.48 
 
 
297 aa  213  3.9999999999999995e-54  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1749  Methylenetetrahydrofolate dehydrogenase (NADP(+))  33 
 
 
288 aa  141  9.999999999999999e-33  Methylobacterium populi BJ001  Bacteria  normal  0.32958  normal  0.767323 
 
 
-
 
NC_010172  Mext_1797  methylenetetrahydrofolate dehydrogenase (NADP(+))  33.33 
 
 
288 aa  139  6e-32  Methylobacterium extorquens PA1  Bacteria  normal  0.840906  normal  0.369167 
 
 
-
 
NC_011757  Mchl_2133  Methylenetetrahydrofolate dehydrogenase (NADP(+))  33 
 
 
288 aa  138  8.999999999999999e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.297933 
 
 
-
 
NC_010505  Mrad2831_3668  methylenetetrahydrofolate dehydrogenase (NADP(+))  32.39 
 
 
287 aa  130  2.0000000000000002e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.222101  normal  0.39273 
 
 
-
 
NC_008825  Mpe_A3259  methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase  37.16 
 
 
286 aa  126  4.0000000000000003e-28  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6554  methylenetetrahydrofolate dehydrogenase (NADP(+))  32.32 
 
 
287 aa  120  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0995051 
 
 
-
 
NC_011894  Mnod_7114  Methylene-tetrahydromethanopterin dehydrogenase  32.32 
 
 
286 aa  120  3e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0631744  n/a   
 
 
-
 
NC_002977  MCA0508  methylenetetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase  31.34 
 
 
286 aa  119  3.9999999999999996e-26  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_3754  Methylenetetrahydrofolate dehydrogenase (NADP(+))  34.87 
 
 
288 aa  114  2.0000000000000002e-24  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>