| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2888 |
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| Symbol | |
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| ID | 3103697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 3079145 |
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| End bp | 3079912 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637172016 |
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| Product | type IV pilus biogenesis protein PilF, putative |
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| Protein accession | YP_115281 |
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| Protein GI | 53802992 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGAT GGTTGGCCTT GACAGCATTG CTGGGAGCCA TTGCCGCCTG CGCCACGCCG
GAGCAGCGGC CCTACGCGAC CAACGACCCC TACGGCGAAC TCAGCACCGC GGACGTCTAC
GTCCAGAAGG GCGTCCGCTA CATGGCGCAG GGAGCGCTGG AGGTGGCGCT GGAAGACTTG
AAGCATGCGG TGGAGCTGGA TCCCGCCAAC AGCGACGCGC ACGATGCGCT GGCCATCCTG
TACGAGAAGC TGGGCCGGAC CGGGGAGGCC GACCTGCACT TCCGCGAAGC CCTGACGCTG
AACCCGGAGA ATTACAGCGC CTACAACAAC TACGGCCGTT TTCTCTGTCA TACCGGCCAC
ACGGAGGAGG CCCTGGCGCG ATTCGAGGTC GCCTATTCGA CGCCGCTGTA CCCCCAACCC
TGGATTCCTC TCTCCAATGC CGGGACCTGC CTGCGCCGTG CGGGCCGGAC CGCGGAAGCC
GAGCCGTATC TGCGCCGGGC GCTGGAGAAG AACCCCGGCT ACCCCCCAGC GCTACTGGAA
ATGGCCCATG TCAGTCTGGA AACGCGACAA TACCTGTCCA CCCGCGCCTT CCTGCAGCGC
TACCAGGCCG TCGCCGGAGA TACGCCGGAA ACCCTGTGGC TCGGCGTCCA GACCGAACTG
GCCCTGGGCG ATGCCGCCGA GGCCCGGCGG CTGGCCGACC GGATCGGAGT GGATTTCCCG
GATTCGGGCG AAGCCGTACA GGCGCGGCGC CTGTTCGCAC AACCGTGA
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| Protein sequence | MRGWLALTAL LGAIAACATP EQRPYATNDP YGELSTADVY VQKGVRYMAQ GALEVALEDL
KHAVELDPAN SDAHDALAIL YEKLGRTGEA DLHFREALTL NPENYSAYNN YGRFLCHTGH
TEEALARFEV AYSTPLYPQP WIPLSNAGTC LRRAGRTAEA EPYLRRALEK NPGYPPALLE
MAHVSLETRQ YLSTRAFLQR YQAVAGDTPE TLWLGVQTEL ALGDAAEARR LADRIGVDFP
DSGEAVQARR LFAQP
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