Gene MCA2710 details

Gene Information

• Locus tag: MCA2710
• Symbol: thiC
• ID: 3103797
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 2895662
• End bp: 2897536
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637171841
• Product: thiamine biosynthesis protein ThiC
• Protein accession: YP_115111
• Protein GI: 53803179
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0422] Thiamine biosynthesis protein ThiC
• TIGRFAM ID: [TIGR00190] thiamine biosynthesis protein ThiC

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCGA TCCCCCAAGA AATCCTGCAC GAGGCCGTCA CCGCCAAGAA AGCCTCGATC 
CAGCCGTTCG CGGCCTCGGA AAAAGTCTAC CTCCAGGGCA GCCGCCCGGA CCTGCGCGTC 
CCAATGCGCA AGATCAGCCA GTCGGACACG CCCACCAACA CGGGCCGGGA AAAGAACCCG 
CCAGTCTATG TCTACGACAC CTCCGGCCCC TATACCGACC CCACCGTATC GGTCGACCTG 
AGACTGGGCC TGCCGCCCTT GCGCGAGCCC TGGATCGAGG AACGCGGGGA CACCGAGCTG 
CTGAAGGGGC CCTCGTCGTC CTACGGCCTT CAGCGCCAGC GCGATCCGGC TCTGGCGTCC 
CTGCGCTTCG AGCATATCCG CGCGCCCCGC CGGGCGAAGG GCGGCGCCAA CGTCACCCAG 
ATGCACTACG CCAGGCAGGG CATCATCACG CCGGAGATGG AGTTCGTCGC CATCCGCGAG 
AACCAGAAAC TGGAAGCGCT GGCGGAGACA TACAAGTTCC AGCATCCGGG AGAAGCCTTC 
GGCGCGGCCA TCCCCCAGGT CATCACCCCC GAATTCGTCC GCGACGAAGT CGCCCGCGGC 
CGGGCCATCA TCCCCAGCAA CATCAACCAC CCGGAATCGG AGCCGATGAT CATCGGCCGC 
AACTTTCTGG TGAAGATCAA CTGCAACCTC GGCAATTCCG CCGTCAGCTC TTCGATAGAA 
GAGGAAGTGG AAAAGATGCT GTGGGCGATC CGCTGGGGCG GCGACACGGT GATGGACCTG 
TCCACGGGCA AGAACATCCA CGAGACCCGC GAATGGATCA TCCGCAATTC CCCGGTGCCC 
ATCGGCACCG TGCCGATCTA CCAGGCGCTG GAAAAGGTGG ACGGCAAGGC CGAGGAGCTG 
ACCTGGGAAA TCTTCCGCGA CACGCTGATC GAGCAGGCCG AGCAGGGGGT GGACTATTTC 
ACCATCCATG CCGGCATCCG CCTGCCCTTC ATCCCGCTGA CCGCCAAGCG CACCACCGGC 
ATCGTGTCCC GGGGCGGCTC CATCATGGCC AAATGGTGCC TGGCCCACCA CAAGGAGAGC 
TTCCTCTACA CCCATTTCGA GGACATCTGC GAGATCATGA AGGCCTACGA CGTGGCCTTC 
TCCCTGGGTG ATGGCCTGCG CCCCGGTTCC ATCGCCGATG CCAACGACGA GGCTCAGTTC 
GCGGAATTGC GCACCCTGGG CGAGCTGACC CGGATCGCCT GGAAGCACGA CGTGCAGGTG 
ATGATCGAAG GTCCCGGCCA CGTGCCCATG CACATGATCA AGGCCAACAT GGAGGAGCAG 
CTCAAGCATT GCCACGAGGC GCCCTTCTAC ACCCTGGGAC CCTTGACCAC CGACATCGCG 
CCGGGCTACG ACCACATCAC CTCGGCCATC GGCGCCGCCA TGATCGGCTG GTACGGCACG 
GCCATGCTGT GCTACGTCAC GCCCAAGGAG CATCTGGGCC TGCCGAACAA GCAGGACGTG 
CGCGACGGCA TCATCGCCTA CAAGATCGCC GCCCACGCTG CGGATCTGGC CAAGGGCCAC 
CCCGGCGCCC AGGCGCGCGA CAATGCCCTG TCCAAGGCAC GCTTCGAGTT CCGCTGGCAG 
GATCAGTTCA ACCTGTCGCT GGACCCCGAG AAGGCGTTGG AATTCCATGA CGAGACACTG 
CCCCAGGAAG GGGCGAAACA GGCGCATTTC TGCTCCATGT GCGGCCCGCA TTTCTGCTCG 
ATGAAGATCA CCCAGGACGT GCGCGACTAT GCCCGCGAAC ACGGCCTGGA CGAGGCGCAA 
GCCCTGGCGA AAGGCATGGA AGAAAAATCG GACGAGTTCG TGAGGTCCGG GGCCGAGGTG 
TACCAGCGCA CCTGA 

 

Protein sequence

MSAIPQEILH EAVTAKKASI QPFAASEKVY LQGSRPDLRV PMRKISQSDT PTNTGREKNP 
PVYVYDTSGP YTDPTVSVDL RLGLPPLREP WIEERGDTEL LKGPSSSYGL QRQRDPALAS 
LRFEHIRAPR RAKGGANVTQ MHYARQGIIT PEMEFVAIRE NQKLEALAET YKFQHPGEAF 
GAAIPQVITP EFVRDEVARG RAIIPSNINH PESEPMIIGR NFLVKINCNL GNSAVSSSIE 
EEVEKMLWAI RWGGDTVMDL STGKNIHETR EWIIRNSPVP IGTVPIYQAL EKVDGKAEEL 
TWEIFRDTLI EQAEQGVDYF TIHAGIRLPF IPLTAKRTTG IVSRGGSIMA KWCLAHHKES 
FLYTHFEDIC EIMKAYDVAF SLGDGLRPGS IADANDEAQF AELRTLGELT RIAWKHDVQV 
MIEGPGHVPM HMIKANMEEQ LKHCHEAPFY TLGPLTTDIA PGYDHITSAI GAAMIGWYGT 
AMLCYVTPKE HLGLPNKQDV RDGIIAYKIA AHAADLAKGH PGAQARDNAL SKARFEFRWQ 
DQFNLSLDPE KALEFHDETL PQEGAKQAHF CSMCGPHFCS MKITQDVRDY AREHGLDEAQ 
ALAKGMEEKS DEFVRSGAEV YQRT