Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2622 |
Symbol | smpA |
ID | 3103424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 2809121 |
End bp | 2809606 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637171756 |
Product | small protein A |
Protein accession | YP_115026 |
Protein GI | 53803225 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2913] Small protein A (tmRNA-binding) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.627483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCACG GTGCCGCTCG AACCCGGCTG CGATTTCATT CCGTCATGCC CCCACATCGT ACCATACTCT CCCTGATCGC CACTCTCCCG CTGGCCGCCT GCACCTATGT CGACCGGATC CCCTTCCTTT ACCACCTGGA CATTCATCAG GGGAACATCG TCTCGCAGGA AATGGTGGAC CAGCTAAAGC CGGGTATGAA CAGGCGCCAG GTGACCTTCA TCATGGGGTC GCCACTCACG GTGAGCCCGT TCCATGATGA CCGCTGGGAC TACGTCTATT CCAACCAGCC GGGTGGAGAG GAGCGCGTGC AGCGCCGGAT ATCGCTTCTG TTTGATCACG ACGAGCTGGT GGGGCTGCAG GGGGATTTCA AGCCGGGTGA ACTGCCATCC CTGGATGCCA GCAAGGACGT CAACGTCGAC ATCCCCAAGA TCGAGCGCGA CCAGAGTTTG TGGGGACACA TCAAGAGCTG GTTCGGCAGC GGCTAG
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Protein sequence | MRHGAARTRL RFHSVMPPHR TILSLIATLP LAACTYVDRI PFLYHLDIHQ GNIVSQEMVD QLKPGMNRRQ VTFIMGSPLT VSPFHDDRWD YVYSNQPGGE ERVQRRISLL FDHDELVGLQ GDFKPGELPS LDASKDVNVD IPKIERDQSL WGHIKSWFGS G
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