| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2164 |
|---|
| Symbol | |
|---|
| ID | 3104948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 2334837 |
|---|
| End bp | 2337980 |
|---|
| Gene Length | 3144 bp |
|---|
| Protein Length | 1047 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637171313 |
|---|
| Product | DNA polymerase III, alpha subunit, putative |
|---|
| Protein accession | YP_114587 |
|---|
| Protein GI | 53803568 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0587] DNA polymerase III, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGTT CGGCTGAGGC GGTGTTCGCT GAACTGCATG CCTTGAGCAA TTTCAGCTTC
CTGCGCGGCG CCTCGCATCC CAAGGAGCTG GTCGCCGAAG CGGCCCGTCT GGGCTATGCG
GCGCTGGCGC TCACCGATGA ATGCTCGCTG GCCGGCGTGG TACGCGCCCA TGCCGAGGCC
AAGACGCTCG GCTTCAAGCT CATCATCGGC AGCGAATTCC GGCTGGAGGA CGGTCCCAAG
CTGGTGCTGC TGGCGATGGA CCGCCGCGGC TACGGCCAGC TCGCGGCCTT CATCACCCTG
GGGCGGCGGG CGGCGGAGAA AGGGGAATAC CGGCTGCTCC GCGGCCAGCT CGAAACCCAT
CCGCTCGACC AGTGTATTGC GATCTGGCTG CCGGAAGACG CGCCCGATGA CGAAACCGGC
GCGTGGCTGG CGCGGTTGTT TCCGGCCCGC TGCTGGATCG GCGTCGAGCT GTTCCTGAGC
GGCGGAGACG GCCTCCGCCT CTCCGTCCTG CAGGCGCTGG GCGAACGGCT GGGGCTGCCG
CTGGTCGCCT GCAACGACGT CCACATGCAT GCCCGCGAGC GCCAGCCGCT GCAGGACACC
CTGACCGCCA TCCGCCTCGG CCGGCCGCTG GCGGAACTCG GCTACGCGCT GTTTCCGAAC
GGGGAACGCC ATCTGCGTCC CATCGAATTC CTGGCGCGGA TCTATCCACG GGCGCTGCTC
GAAGAATCGC TGCGCATCGC CGAACGCTGC CGGTTTTCGC TGGACGAACT GCGCTACGAA
TACCCGGCCG AGCTGGTGCC GGACGGCTAC ACGGCCATCG CCTGGCTGCG CGAGCTGACC
CGGCAAGGCA TGGCCGAACG CTGGCCGGAG GGCGCGCCGG ACAAGGTGCG GCGGCAGGTC
GAGCACGAAC TGGAACTGAT CGGCGCCATG GCCTACGAGC CGTTCTTCCT GACCGTGCAC
GACGTGGTCC GGTTCGCCCG CAGCCGCGGC ATCCTGTGCC AGGGCAGGGG ATCGGCGGCG
AATTCGGCCG TGTGCTATTG CCTCGGCATC ACCGAGGTCG ACCCGGCCCG GCTCGATCTG
CTGTTCGAGC GTTTCATCTC ACGGGAACGC AACGAGCCGC CCGACATCGA CGTGGATTTC
GAGCATGAGC GGCGCGAGGA GGTCATCCAG TACATCTACC GCAAGTACGG CCGCCACCGG
GCGGCGCTGG CGGCCAGCCT CATCACCTAC CGCGTGAGGA GCGCGGTGCG CGACGTCGCC
CGCGCCCTGG GCTTCTCCCC GTCGCGGATC GACACCCTGG CGCGGGTGCT CGACCGCCAC
GGCGTCGCGG AGACCTTGCC GGAGCGCCTG GCCGAAGCCG GCCTCGCGTC CGAAAACCCG
GCGGTGCGGC GTCTGCTGGC CCTGATGCAG ATGCTGGTGG GTTTCCCCCG CCACCTGTCC
CAGCACGTGG GCGGCTTCGT CATCGCCGCC GAGGACCTGT CGCACTGGGT GCCGGTGGAG
AACGCCGCCA TGCCCGAGCG CACCGTGATC CAGTGGGACA AGGACGACCT GGAATCCCTG
GGTCTTCTCA AGGTCGACGT CCTCTCCTTG GGCATGCTGA CCGCGATCCG CAAGGCGCTG
GCCTATGTCG GCGAAGGGCG GGGCCGGCCG TTCACGCTGG CCGACGTTCC CCCGGAAGAC
CCGGCGGTGT ATGAGATGCT GCAGCGGGCC GACAGCATCG GCGTGTTCCA GGTGGAATCG
CGGGCGCAGA TGAGCATGCT GCCGAGGCTA CGTCCCCAGA GCTACTACGA CCTGGTGATC
CAGATCGCCA TCGTCCGGCC CGGACCGATC CAGGGCGACA TGGTGCATCC CTATCTGACC
CGGCGGGCCG GGCTGGAGCC GGTGTCCTAC CCCAGCCCCG CTGTGGAGAA GGTGCTGAAG
CGGACGCTGG GCGTGCCGAT CTTCCAGGAG CAGGTGATGC AACTGGCCAT GGTCGCCGCC
GGATTCACGC CGGGCGAGGC CGACCGGTTG CGCCGCGCCA TGGCCGCATG GCACCGCAAG
GGCGGGCTGG AGCCGTTCGA AAAGAAGCTG ATGGACGGGA TGCGCGAACG CGGCTACGAA
GAGCGCTTCG CCCGCCAGAT CTACCGCCAG ATCCGGGGCT TCGGCGAATA CGGCTTCCCC
GAGTCGCATT CCGCCAGCTT CGCCCTCCTG GCCTACGTCT CCGCCTGGCT CAAATGCCAC
CATCCCGCCG CCTTCGCCTG CGCCCTCCTC AACAGCCAGC CGATGGGCTT CTACGGCCCC
TCCCAGCTCA TCCAGGACGC CCGCCGCCAC GGCGTCGAAG TGCGGCCGAT CGACGTCAAC
CACAGCGACT GGGACTGCAC GCTGGAGCCG ACTGAGATTC CTAACCCCCT CTCCCTCTGG
GAGAGGGTTG GGGTGAGGGC CCTTCAAACA GGTAGCAATC CCGCCCTCCG CCTCGGCCTG
CGCCTGGTCA ACGGATTCTC GTCCGCTGCG GCACAACGCC TGAGCGACGC CCGCCGGCAG
GGACCGTTCC AAAGCATTCA GGACCTTGCC ACCCGCGTCC CGCTCGACCG CCGCGAACTG
GAAGCCCTGG CCGCCGCCGA CGCCCTGCAC GGATTGGGAG GGCACCGCCA TCGCGCCTTC
TGGGAGGCCG CCGGCGTGGA AGCACCGACC CCGCTCTATG CCGAACCGCA ATTCGCCGAA
GCCGAGCCCT TGCTGAGGAA ACCGGGCGAA GCCGAGGACG TCATCGCCGA CTACGCCGCC
GCCGGCGCCA GCCTGCGCCG CCATCCCTTG AGCCTACTGC GGGAGCGGCT GGACCGCCGC
GGCTTCCGCA CCGCCGAAGC GCTGTGGCAG GTGAGGAACG GCGCCATCGC CCGCGTCGCC
GGCCTCGTGG TCTGCCGCCA GCGCCCCATG ACCGCCAACG GCACCACCTT CGTCACGATC
GAAGACGAAA CCGGCCAGAT CAACCTCATC GTCTGGCCCG CCACCGCCCA GGCCCAACGC
CGTGCGCTGC TGCGCGCCCA TCTTCTCGCG GTATCCGGCA CCGTGCAGCA GGAAGAAGGC
GTATTGCACC TCGTCGCCGG GCGGCTGGAA GATATCGGAA AATGGCTGGA CGGGTTGGTG
GTCAAGTCCA GGGATTTTCA GTGA
|
|---|
| Protein sequence | MACSAEAVFA ELHALSNFSF LRGASHPKEL VAEAARLGYA ALALTDECSL AGVVRAHAEA
KTLGFKLIIG SEFRLEDGPK LVLLAMDRRG YGQLAAFITL GRRAAEKGEY RLLRGQLETH
PLDQCIAIWL PEDAPDDETG AWLARLFPAR CWIGVELFLS GGDGLRLSVL QALGERLGLP
LVACNDVHMH ARERQPLQDT LTAIRLGRPL AELGYALFPN GERHLRPIEF LARIYPRALL
EESLRIAERC RFSLDELRYE YPAELVPDGY TAIAWLRELT RQGMAERWPE GAPDKVRRQV
EHELELIGAM AYEPFFLTVH DVVRFARSRG ILCQGRGSAA NSAVCYCLGI TEVDPARLDL
LFERFISRER NEPPDIDVDF EHERREEVIQ YIYRKYGRHR AALAASLITY RVRSAVRDVA
RALGFSPSRI DTLARVLDRH GVAETLPERL AEAGLASENP AVRRLLALMQ MLVGFPRHLS
QHVGGFVIAA EDLSHWVPVE NAAMPERTVI QWDKDDLESL GLLKVDVLSL GMLTAIRKAL
AYVGEGRGRP FTLADVPPED PAVYEMLQRA DSIGVFQVES RAQMSMLPRL RPQSYYDLVI
QIAIVRPGPI QGDMVHPYLT RRAGLEPVSY PSPAVEKVLK RTLGVPIFQE QVMQLAMVAA
GFTPGEADRL RRAMAAWHRK GGLEPFEKKL MDGMRERGYE ERFARQIYRQ IRGFGEYGFP
ESHSASFALL AYVSAWLKCH HPAAFACALL NSQPMGFYGP SQLIQDARRH GVEVRPIDVN
HSDWDCTLEP TEIPNPLSLW ERVGVRALQT GSNPALRLGL RLVNGFSSAA AQRLSDARRQ
GPFQSIQDLA TRVPLDRREL EALAAADALH GLGGHRHRAF WEAAGVEAPT PLYAEPQFAE
AEPLLRKPGE AEDVIADYAA AGASLRRHPL SLLRERLDRR GFRTAEALWQ VRNGAIARVA
GLVVCRQRPM TANGTTFVTI EDETGQINLI VWPATAQAQR RALLRAHLLA VSGTVQQEEG
VLHLVAGRLE DIGKWLDGLV VKSRDFQ
|
|---|
| |