Gene MCA2077 details

Gene Information

• Locus tag: MCA2077
• Symbol: rnt
• ID: 3103856
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 2236751
• End bp: 2237380
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637171231
• Product: ribonuclease T
• Protein accession: YP_114507
• Protein GI: 53803894
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
• TIGRFAM ID: [TIGR01298] ribonuclease T

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATCCC GCAAATCCCC CCTGGCCCGG CGTTTCCGGA GTTATCTGCC GGTCGTCGTG 
GACGTCGAAA CCTCAGGGTT CGATCCGCAC GCCAATGCCT TGCTCGAAAT CGCCGCCGTC 
CACCTGGATA TGGACGAATC GGGGAATCTT CACCCCGTCC GCACCCATCA GCTGCATGTG 
AAACCCTTCG AAGGCGCCAA GCTGGATGAG GCCGCACTGA ACTTCAACAA AATCAACCCG 
TTTCATCCGT TCCGGTTCGC GGTGGACGAA CGCGAGGCTC TGTCGCAGAT TTTCGACGCC 
GTCCAGCAGT CCATCCGCCA GCACGGCTGC ACGAGGGCGA TCCTGGTGGG TCACAACCCG 
GCCTTCGACA TCGCCTTCCT CAACGCGGCA TCGAGCCGCG CCAGGATCAA GAAGAACCCC 
TTCCACCCAT TCAGCACGTT CGACACCGCG ACCCTGGGGG GACTCGCCTA CGGCCAGACC 
GTGCTGGCAC GAGCGGCGCA AGCGGCGGGA CTCAGCTGGG ACCATCAGGA GGCCCATTCC 
GCCGCTTACG ACGCCAACCA GACCGCCCGG CTGTTTTGCA CCATCGTCAA CCGCTGGAAG 
CGGATGACCG AACTCCTGCC GCCGGAGTGA 

 

Protein sequence

MTSRKSPLAR RFRSYLPVVV DVETSGFDPH ANALLEIAAV HLDMDESGNL HPVRTHQLHV 
KPFEGAKLDE AALNFNKINP FHPFRFAVDE REALSQIFDA VQQSIRQHGC TRAILVGHNP 
AFDIAFLNAA SSRARIKKNP FHPFSTFDTA TLGGLAYGQT VLARAAQAAG LSWDHQEAHS 
AAYDANQTAR LFCTIVNRWK RMTELLPPE