Gene MCA1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1870 
Symbol 
ID3103168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp2010202 
End bp2011047 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content65% 
IMG OID637171029 
Productriboflavin biosynthesis protein RibD domain-containing protein 
Protein accessionYP_114307 
Protein GI53803825 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCCG GCAAATCCGT TTACCGGCTG TTCCCGCCGC CGTTCGAGGA GGTCTCGCTG 
CACGGCCTTT ACCTGAATCT GAACCTGCAC CGCCTGGGCA CTGCCGGCAA GCCGTTCGTT
TACGCCAATT TCCTCACCAG CCTGGACGGA CGCATCGCCC TGGAGGATGC CAGCGGTCAG
ACCTTTCTCC CGAAGTCGCT GACCACGCCG GACGATTTCC GGTTGTTCCT CGAGCTGGAA
GCCCAGGCCG ACTGCCTCAT CACCCACGGC GGCTATCTGC GCTCGCTGCA GGAACGACGG
TTGGGCAACA TCCTGCAGAT CGGACTGGAT GAACGCTCGC GCGACCTCTC AGTCTGGCGC
AAGACGCAGG GTCTCAAACC ACAGCCGGAC ATCGTCGTCG CCAGCGCCAG CCTCGATTTC
CCCATGCCCG CCTCGATCCA CGAACACGGC CAGCGCTGCC TGATCGCCAC CGGTCGCCAT
GCCGATCCCG AGCGGGTCCG CCATTGGGAA CGCGAAGGCC ATGAAATCCT GTTCGCCGGC
GACGGCGCCA TGGCCGAAGG CGACACCCTG GTCGATCAAC TCGACGCCCT GGGCTACCGC
TCCCTCTACC TGATTGCCGG CCCCCGCATG CTCGACACCA TGGTCCGCAA CGGCCGCCTG
TGCCGGCTGT TCCAAACCAT CACCCACCAG CTGCTCGGTG GCGAAGGCTT CCGCACCCTG
GTGCCCGGCC CGGAACTCGG CCCGCATGGC CATCTGAAGA TGCAGTCCCT GTACTACGAC
CCGACCTCAC CGCTCGGCAC CGGGCAGTGG TTCGCCCAGT TCGAAAACCT GACCGTGGCC
GCTTGA
 
Protein sequence
MNPGKSVYRL FPPPFEEVSL HGLYLNLNLH RLGTAGKPFV YANFLTSLDG RIALEDASGQ 
TFLPKSLTTP DDFRLFLELE AQADCLITHG GYLRSLQERR LGNILQIGLD ERSRDLSVWR
KTQGLKPQPD IVVASASLDF PMPASIHEHG QRCLIATGRH ADPERVRHWE REGHEILFAG
DGAMAEGDTL VDQLDALGYR SLYLIAGPRM LDTMVRNGRL CRLFQTITHQ LLGGEGFRTL
VPGPELGPHG HLKMQSLYYD PTSPLGTGQW FAQFENLTVA A